Strain Fitness in Shewanella loihica PV-4 around Shew_2496

Experiment: Vancomycin 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vancomycin 0.0625 mg/ml
2,934,524	+				-0.2
2,934,613	+				-0.1
2,934,636	+		Shew_2494	0.11	-0.3
2,934,926	+		Shew_2494	0.84	+0.7
2,935,299	-				-0.4
2,935,360	+		Shew_2496	0.18	-1.2
2,935,611	-		Shew_2496	0.55	-2.0
2,935,611	-		Shew_2496	0.55	+2.6
2,935,682	-		Shew_2496	0.65	-2.0
2,935,953	+				-0.8
2,936,122	+				-0.4
2,936,130	-				+0.3
2,936,130	-				-0.1
2,936,142	-				+0.1
2,936,142	-				-0.5
2,936,249	+		Shew_2497	0.14	+0.8
2,936,436	+		Shew_2497	0.32	-0.5
2,936,436	+		Shew_2497	0.32	+0.5
2,936,444	-		Shew_2497	0.32	-0.4
2,936,517	+		Shew_2497	0.39	-1.1
2,936,810	+		Shew_2497	0.67	+0.3