Strain Fitness in Shewanella loihica PV-4 around Shew_2372
Experiment: Vancomycin 0.0625 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Vancomycin 0.0625 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,773,707 | + | Shew_2371 | 0.57 | -1.0 | |
2,773,900 | - | Shew_2371 | 0.69 | +0.2 | |
2,774,095 | + | Shew_2371 | 0.80 | -0.0 | |
2,774,163 | - | Shew_2371 | 0.84 | -0.2 | |
2,774,542 | - | Shew_2372 | 0.35 | -1.7 | |
2,774,731 | - | +0.7 | |||
2,774,772 | + | -0.3 | |||
2,774,984 | + | +0.6 | |||
2,775,213 | - | Shew_2373 | 0.31 | +0.0 | |
2,775,316 | - | Shew_2373 | 0.48 | -0.1 | |
2,775,562 | + | Shew_2373 | 0.86 | -0.1 | |
2,775,570 | - | Shew_2373 | 0.88 | -0.5 | |
2,775,570 | - | Shew_2373 | 0.88 | -0.1 |
Or see this region's nucleotide sequence