Strain Fitness in Shewanella loihica PV-4 around Shew_2208
Experiment: Vancomycin 0.0625 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Vancomycin 0.0625 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 2,569,710 | + | -0.1 | |||
| 2,570,641 | - | Shew_2208 | 0.16 | -0.1 | |
| 2,570,660 | - | Shew_2208 | 0.17 | +0.1 | |
| 2,570,725 | + | Shew_2208 | 0.21 | -0.2 | |
| 2,570,944 | - | Shew_2208 | 0.33 | +0.8 | |
| 2,571,368 | + | Shew_2208 | 0.56 | +0.1 | |
| 2,571,641 | + | Shew_2208 | 0.71 | +0.3 | |
| 2,571,815 | + | Shew_2208 | 0.81 | +3.8 | |
| 2,571,860 | + | Shew_2208 | 0.83 | +0.4 | |
| 2,571,903 | + | Shew_2208 | 0.86 | +0.6 | |
| 2,572,085 | + | +0.3 | |||
| 2,572,130 | + | +0.7 | |||
| 2,572,649 | - | -0.6 | |||
| 2,573,043 | + | +0.4 |
Or see this region's nucleotide sequence