Strain Fitness in Shewanella loihica PV-4 around Shew_1407

Experiment: Vancomycin 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vancomycin 0.0625 mg/ml
1,619,734	+				-1.9
1,619,740	-				-2.2
1,619,769	+				-0.5
1,619,777	-				+0.6
1,619,907	+				-1.9
1,619,961	+				-1.0
1,619,961	+				-3.3
1,619,961	+				-1.1
1,619,969	-				-1.4
1,619,992	+				-1.2
1,619,992	+				-1.9
1,620,013	+		Shew_1407	0.12	-2.1
1,620,013	+		Shew_1407	0.12	-1.8
1,620,013	+		Shew_1407	0.12	-1.8
1,620,128	+		Shew_1407	0.28	-2.1
1,620,128	+		Shew_1407	0.28	-2.0
1,620,128	+		Shew_1407	0.28	-1.7
1,620,128	+		Shew_1407	0.28	-1.7
1,620,132	+		Shew_1407	0.28	-2.1
1,620,138	+		Shew_1407	0.29	-2.7
1,620,138	+		Shew_1407	0.29	-2.3
1,620,139	+		Shew_1407	0.29	-2.5
1,620,139	+		Shew_1407	0.29	-1.7
1,620,150	-		Shew_1407	0.31	-0.5
1,620,151	-		Shew_1407	0.31	-0.6
1,620,213	-		Shew_1407	0.39	-2.4
1,620,239	+		Shew_1407	0.43	-1.6
1,620,255	+		Shew_1407	0.45	-1.5
1,620,309	+		Shew_1407	0.52	-0.5
1,620,314	+		Shew_1407	0.53	-2.1
1,620,370	+		Shew_1407	0.60	-2.5
1,620,412	+		Shew_1407	0.66	-2.0
1,620,412	+		Shew_1407	0.66	-1.7
1,620,419	+		Shew_1407	0.67	-1.9
1,620,420	-		Shew_1407	0.67	-1.4
1,620,420	-		Shew_1407	0.67	-1.4
1,620,439	+		Shew_1407	0.70	-2.8
1,620,446	+		Shew_1407	0.71	-0.2
1,620,605	+				-2.1
1,620,611	+				-1.0