Strain Fitness in Shewanella loihica PV-4 around Shew_0810
Experiment: Vancomycin 0.0625 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Vancomycin 0.0625 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 930,731 | + | Shew_0809 | 0.84 | +0.2 | |
| 930,786 | + | Shew_0809 | 0.85 | +0.2 | |
| 931,046 | + | -0.6 | |||
| 931,054 | - | +0.4 | |||
| 931,054 | - | +1.7 | |||
| 931,087 | - | -0.2 | |||
| 931,197 | + | +0.1 | |||
| 931,317 | + | -0.0 | |||
| 931,534 | - | -0.0 | |||
| 931,653 | + | +0.1 | |||
| 932,197 | + | Shew_0810 | 0.54 | -1.1 | |
| 932,327 | - | Shew_0810 | 0.67 | -0.1 | |
| 932,349 | + | Shew_0810 | 0.69 | -0.4 | |
| 932,629 | + | +0.3 | |||
| 932,637 | - | +0.1 |
Or see this region's nucleotide sequence