Experiment: m.b. Cobalt chloride 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_3574 and Dshi_3575 overlap by 1 nucleotides Dshi_3575 and Dshi_3576 overlap by 4 nucleotides Dshi_3576 and Dshi_3577 are separated by 141 nucleotides
Dshi_3574: Dshi_3574 - 3'(2'),5'-bisphosphate nucleotidase (RefSeq), at 3,764,320 to 3,765,117
_3574
Dshi_3575: Dshi_3575 - 3-deoxy-D-manno-octulosonate cytidylyltransferase (RefSeq), at 3,765,117 to 3,765,917
_3575
Dshi_3576: Dshi_3576 - glycosyl transferase family 2 (RefSeq), at 3,765,914 to 3,767,146
_3576
Dshi_3577: Dshi_3577 - UTP-glucose-1-phosphate uridylyltransferase (RefSeq), at 3,767,288 to 3,768,184
_3577
Position (kb)
3765
3766
3767
3768 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3 at 3766.099 kb on - strand, within Dshi_3576 at 3766.213 kb on - strand, within Dshi_3576 at 3766.308 kb on + strand, within Dshi_3576 at 3766.385 kb on + strand, within Dshi_3576 at 3766.526 kb on - strand, within Dshi_3576 at 3766.541 kb on + strand, within Dshi_3576 at 3766.733 kb on + strand, within Dshi_3576 at 3766.733 kb on + strand, within Dshi_3576 at 3766.738 kb on + strand, within Dshi_3576 at 3766.764 kb on + strand, within Dshi_3576 at 3766.803 kb on - strand, within Dshi_3576 at 3766.859 kb on - strand, within Dshi_3576 at 3766.866 kb on - strand, within Dshi_3576 at 3766.909 kb on - strand, within Dshi_3576 at 3766.918 kb on + strand, within Dshi_3576 at 3766.962 kb on - strand, within Dshi_3576 at 3766.962 kb on - strand, within Dshi_3576 at 3766.973 kb on + strand, within Dshi_3576 at 3767.022 kb on + strand, within Dshi_3576 at 3767.028 kb on + strand at 3767.154 kb on + strand at 3767.186 kb on - strand at 3767.188 kb on - strand at 3767.194 kb on + strand at 3767.202 kb on + strand at 3767.210 kb on - strand at 3767.210 kb on - strand at 3767.264 kb on - strand at 3767.264 kb on - strand at 3767.293 kb on + strand at 3767.301 kb on - strand at 3767.301 kb on - strand at 3767.750 kb on - strand, within Dshi_3577 at 3767.828 kb on + strand, within Dshi_3577
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.5 mM remove 3,766,099 - Dshi_3576 0.15 -2.2 3,766,213 - Dshi_3576 0.24 +1.7 3,766,308 + Dshi_3576 0.32 -1.9 3,766,385 + Dshi_3576 0.38 +0.1 3,766,526 - Dshi_3576 0.50 -1.9 3,766,541 + Dshi_3576 0.51 +0.1 3,766,733 + Dshi_3576 0.66 +0.1 3,766,733 + Dshi_3576 0.66 -0.7 3,766,738 + Dshi_3576 0.67 -2.9 3,766,764 + Dshi_3576 0.69 -1.3 3,766,803 - Dshi_3576 0.72 -2.7 3,766,859 - Dshi_3576 0.77 -1.4 3,766,866 - Dshi_3576 0.77 +0.1 3,766,909 - Dshi_3576 0.81 +1.1 3,766,918 + Dshi_3576 0.81 -1.9 3,766,962 - Dshi_3576 0.85 +3.3 3,766,962 - Dshi_3576 0.85 -2.5 3,766,973 + Dshi_3576 0.86 -0.9 3,767,022 + Dshi_3576 0.90 -3.5 3,767,028 + +0.1 3,767,154 + -1.5 3,767,186 - -4.0 3,767,188 - -2.5 3,767,194 + -0.3 3,767,202 + +0.9 3,767,210 - +0.7 3,767,210 - -2.7 3,767,264 - -0.9 3,767,264 - -1.7 3,767,293 + -1.5 3,767,301 - +0.1 3,767,301 - +2.1 3,767,750 - Dshi_3577 0.52 -3.5 3,767,828 + Dshi_3577 0.60 +0.1
Or see this region's nucleotide sequence