Experiment: m.b. Cobalt chloride 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_3487 and Dshi_3488 overlap by 14 nucleotides Dshi_3488 and Dshi_3489 overlap by 4 nucleotides
Dshi_3487: Dshi_3487 - Hsp33 protein (RefSeq), at 3,667,814 to 3,668,812
_3487
Dshi_3488: Dshi_3488 - NUDIX hydrolase (RefSeq), at 3,668,799 to 3,669,398
_3488
Dshi_3489: Dshi_3489 - Polynucleotide adenylyltransferase region (RefSeq), at 3,669,395 to 3,670,543
_3489
Position (kb)
3668
3669
3670 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3 at 3667.803 kb on - strand at 3667.803 kb on - strand at 3667.803 kb on - strand at 3667.818 kb on - strand at 3667.818 kb on - strand at 3667.826 kb on - strand at 3667.974 kb on - strand, within Dshi_3487 at 3668.209 kb on + strand, within Dshi_3487 at 3668.241 kb on - strand, within Dshi_3487 at 3668.269 kb on - strand, within Dshi_3487 at 3668.435 kb on + strand, within Dshi_3487 at 3668.517 kb on + strand, within Dshi_3487 at 3668.526 kb on + strand, within Dshi_3487 at 3668.527 kb on - strand, within Dshi_3487 at 3668.541 kb on + strand, within Dshi_3487 at 3668.546 kb on + strand, within Dshi_3487 at 3668.556 kb on + strand, within Dshi_3487 at 3668.607 kb on - strand, within Dshi_3487 at 3668.617 kb on - strand, within Dshi_3487 at 3668.635 kb on - strand, within Dshi_3487 at 3668.645 kb on - strand, within Dshi_3487 at 3668.703 kb on - strand, within Dshi_3487 at 3668.705 kb on + strand, within Dshi_3487 at 3668.708 kb on - strand, within Dshi_3487 at 3668.776 kb on - strand at 3668.791 kb on - strand at 3668.793 kb on + strand at 3668.801 kb on - strand at 3668.838 kb on - strand at 3668.964 kb on - strand, within Dshi_3488 at 3669.162 kb on - strand, within Dshi_3488 at 3669.167 kb on + strand, within Dshi_3488 at 3669.175 kb on - strand, within Dshi_3488 at 3669.185 kb on - strand, within Dshi_3488 at 3669.194 kb on + strand, within Dshi_3488 at 3669.214 kb on + strand, within Dshi_3488 at 3669.314 kb on + strand, within Dshi_3488 at 3669.322 kb on - strand, within Dshi_3488 at 3669.326 kb on + strand, within Dshi_3488 at 3669.334 kb on - strand, within Dshi_3488 at 3669.334 kb on - strand, within Dshi_3488 at 3669.342 kb on - strand at 3669.346 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.5 mM remove 3,667,803 - -0.9 3,667,803 - +0.1 3,667,803 - -1.7 3,667,818 - -0.9 3,667,818 - +0.7 3,667,826 - -2.6 3,667,974 - Dshi_3487 0.16 -2.5 3,668,209 + Dshi_3487 0.40 -0.9 3,668,241 - Dshi_3487 0.43 -3.9 3,668,269 - Dshi_3487 0.46 -1.5 3,668,435 + Dshi_3487 0.62 -1.0 3,668,517 + Dshi_3487 0.70 +3.1 3,668,526 + Dshi_3487 0.71 -3.2 3,668,527 - Dshi_3487 0.71 +0.6 3,668,541 + Dshi_3487 0.73 -1.9 3,668,546 + Dshi_3487 0.73 -0.7 3,668,556 + Dshi_3487 0.74 -3.3 3,668,607 - Dshi_3487 0.79 +0.5 3,668,617 - Dshi_3487 0.80 +3.7 3,668,635 - Dshi_3487 0.82 -0.6 3,668,645 - Dshi_3487 0.83 -0.5 3,668,703 - Dshi_3487 0.89 -0.4 3,668,705 + Dshi_3487 0.89 -2.5 3,668,708 - Dshi_3487 0.89 -2.7 3,668,776 - +0.9 3,668,791 - +0.5 3,668,793 + -2.5 3,668,801 - +0.1 3,668,838 - -1.2 3,668,964 - Dshi_3488 0.28 +0.9 3,669,162 - Dshi_3488 0.60 -0.5 3,669,167 + Dshi_3488 0.61 +0.5 3,669,175 - Dshi_3488 0.63 -0.6 3,669,185 - Dshi_3488 0.64 +1.1 3,669,194 + Dshi_3488 0.66 -0.1 3,669,214 + Dshi_3488 0.69 -0.2 3,669,314 + Dshi_3488 0.86 +0.2 3,669,322 - Dshi_3488 0.87 -0.5 3,669,326 + Dshi_3488 0.88 +1.7 3,669,334 - Dshi_3488 0.89 -1.7 3,669,334 - Dshi_3488 0.89 +1.7 3,669,342 - -0.1 3,669,346 + -0.7
Or see this region's nucleotide sequence