Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_3388

Experiment: m.b. Cobalt chloride 0.5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Cobalt chloride 0.5 mM
3,565,590	+				+1.1
3,565,590	+				-0.4
3,565,617	+				+0.4
3,565,625	-				+0.1
3,565,631	+				+0.7
3,565,638	+				+0.8
3,565,643	+				+0.3
3,565,645	+				-0.4
3,565,646	-				+0.7
3,565,646	-				+2.1
3,565,664	+				+0.4
3,565,664	+				+1.0
3,565,668	-				+0.5
3,565,672	-				+1.3
3,565,674	+				+1.0
3,565,674	+				-0.6
3,565,675	-				-0.4
3,565,681	-				-0.6
3,565,682	-				+1.0
3,565,703	+				+0.3
3,565,713	+				-1.4
3,565,713	+				+0.7
3,565,713	+				-0.1
3,565,713	+				+0.0
3,565,721	-				+0.3
3,565,721	-				+0.6
3,565,721	-				+3.1
3,565,721	-				-0.3
3,565,721	-				-0.9
3,565,721	-				-0.3
3,565,721	-				+2.1
3,565,721	-				+0.0
3,565,721	-				-0.1
3,565,723	+				+1.2
3,565,724	+				-1.7
3,565,724	+				+1.0
3,565,724	+				+2.7
3,565,724	+				-0.5
3,565,724	+				+0.1
3,565,732	-				-0.4
3,565,732	-				-1.0
3,565,732	-				-0.7
3,565,732	-				+0.7
3,565,758	+				-0.3
3,565,758	+				-0.2
3,565,766	-				+1.0
3,565,766	-				-0.0
3,565,766	-				-2.1
3,565,768	+				-0.2
3,565,770	+				+0.3
3,565,778	-				-0.3
3,565,778	-				+1.7
3,565,779	+				-0.4
3,565,779	+				+0.0
3,565,779	+				-0.2
3,565,779	+				-1.9
3,565,780	+				+0.8
3,565,787	-				-0.6
3,565,787	-				-0.6
3,565,792	+				+0.3
3,565,834	+		Dshi_3387	0.12	+1.1
3,565,834	+		Dshi_3387	0.12	-0.3
3,565,834	+		Dshi_3387	0.12	-0.3
3,565,841	-		Dshi_3387	0.13	-0.2
3,565,842	-		Dshi_3387	0.13	-0.1
3,565,842	-		Dshi_3387	0.13	+0.4
3,565,842	-		Dshi_3387	0.13	+0.5
3,565,842	-		Dshi_3387	0.13	+0.4
3,565,842	-		Dshi_3387	0.13	-0.2
3,565,842	-		Dshi_3387	0.13	-0.2
3,565,844	+		Dshi_3387	0.13	-0.9
3,565,859	+		Dshi_3387	0.15	-2.3
3,565,859	+		Dshi_3387	0.15	+0.4
3,565,859	+		Dshi_3387	0.15	-0.3
3,565,859	+		Dshi_3387	0.15	-1.5
3,565,859	+		Dshi_3387	0.15	-0.3
3,565,867	-		Dshi_3387	0.16	+1.1
3,565,867	-		Dshi_3387	0.16	-0.0
3,565,867	-		Dshi_3387	0.16	+1.5
3,565,871	+		Dshi_3387	0.16	+0.7
3,565,879	-		Dshi_3387	0.17	+0.5
3,565,883	+		Dshi_3387	0.18	-2.1
3,565,883	+		Dshi_3387	0.18	+0.9
3,565,883	+		Dshi_3387	0.18	-0.1
3,565,883	+		Dshi_3387	0.18	-0.3
3,565,891	-		Dshi_3387	0.19	-0.8
3,565,891	-		Dshi_3387	0.19	+0.5
3,565,891	-		Dshi_3387	0.19	+1.0
3,565,891	-		Dshi_3387	0.19	+0.5
3,565,891	-		Dshi_3387	0.19	-0.5
3,565,897	+		Dshi_3387	0.20	+0.1
3,565,898	+		Dshi_3387	0.20	-1.4
3,565,907	+		Dshi_3387	0.21	-0.1
3,565,915	-		Dshi_3387	0.22	+1.1
3,565,925	-		Dshi_3387	0.23	-1.5
3,565,927	-		Dshi_3387	0.23	-0.6
3,565,961	-		Dshi_3387	0.27	-0.2
3,565,967	-		Dshi_3387	0.28	-0.0
3,565,978	+		Dshi_3387	0.29	-0.1
3,566,000	-		Dshi_3387	0.32	+3.8
3,566,002	+		Dshi_3387	0.32	-0.1
3,566,002	+		Dshi_3387	0.32	+0.5
3,566,002	+		Dshi_3387	0.32	-1.1
3,566,010	-		Dshi_3387	0.33	-0.5
3,566,010	-		Dshi_3387	0.33	-0.3
3,566,020	-		Dshi_3387	0.34	+0.3
3,566,022	+		Dshi_3387	0.34	+0.9
3,566,022	+		Dshi_3387	0.34	+0.2
3,566,030	-		Dshi_3387	0.35	+0.1
3,566,051	+		Dshi_3387	0.38	-0.3
3,566,051	+		Dshi_3387	0.38	-0.0
3,566,051	+		Dshi_3387	0.38	-0.4
3,566,057	-		Dshi_3387	0.38	+0.3
3,566,059	-		Dshi_3387	0.38	+0.4
3,566,083	-		Dshi_3387	0.41	-0.1
3,566,083	-		Dshi_3387	0.41	+0.4
3,566,098	+		Dshi_3387	0.43	+0.0
3,566,115	+		Dshi_3387	0.45	-0.6
3,566,115	+		Dshi_3387	0.45	+0.5
3,566,115	+		Dshi_3387	0.45	-0.5
3,566,115	+		Dshi_3387	0.45	+0.9
3,566,115	+		Dshi_3387	0.45	+1.1
3,566,116	+		Dshi_3387	0.45	-0.1
3,566,117	+		Dshi_3387	0.45	+2.1
3,566,123	-		Dshi_3387	0.46	-2.5
3,566,125	-		Dshi_3387	0.46	+3.2
3,566,188	+		Dshi_3387	0.54	+1.0
3,566,196	-		Dshi_3387	0.55	+2.2
3,566,262	+		Dshi_3387	0.62	+0.7
3,566,272	+		Dshi_3387	0.63	+0.9
3,566,277	+		Dshi_3387	0.64	-0.0
3,566,295	-		Dshi_3387	0.66	+0.4
3,566,295	-		Dshi_3387	0.66	+0.5
3,566,297	+		Dshi_3387	0.66	+1.9
3,566,312	+		Dshi_3387	0.68	-2.7
3,566,320	-		Dshi_3387	0.69	-0.7
3,566,321	+		Dshi_3387	0.69	+0.9
3,566,323	+		Dshi_3387	0.69	+0.6
3,566,329	+		Dshi_3387	0.70	-0.0
3,566,331	+		Dshi_3387	0.70	-0.3
3,566,339	-		Dshi_3387	0.71	+0.1
3,566,340	+		Dshi_3387	0.71	-0.6
3,566,340	+		Dshi_3387	0.71	-0.4
3,566,343	+		Dshi_3387	0.72	-0.7
3,566,343	+		Dshi_3387	0.72	-0.1
3,566,345	+		Dshi_3387	0.72	-0.4
3,566,348	-		Dshi_3387	0.72	-0.1
3,566,348	-		Dshi_3387	0.72	-0.5
3,566,351	-		Dshi_3387	0.73	-0.9
3,566,353	-		Dshi_3387	0.73	-0.1
3,566,380	-		Dshi_3387	0.76	+1.5
3,566,384	+		Dshi_3387	0.76	-1.7
3,566,478	-		Dshi_3387	0.87	-0.4
3,566,493	+		Dshi_3387	0.89	-1.9
3,566,501	+				-0.3
3,566,509	-				-0.2
3,566,525	+				+0.8
3,566,532	-				-0.5
3,566,534	+				-3.5
3,566,572	-				-0.2
3,566,601	+				-0.3
3,566,601	+				-0.0
3,566,629	+				-0.3
3,566,629	+				-0.3
3,566,629	+				+0.4
3,566,635	-				+1.6
3,566,637	-				+0.0
3,566,637	-				-0.2
3,566,637	-				+1.6
3,566,637	-				+0.4
3,566,646	-				-0.1
3,566,662	+				-0.3
3,566,665	-				+0.3
3,566,670	-				-0.3
3,566,670	-				+3.6
3,566,670	-				+0.3
3,566,671	+				+0.2
3,566,671	+				+0.4
3,566,700	+				-1.1
3,566,711	+				+0.4
3,566,760	+		Dshi_3388	0.12	-5.0
3,566,779	-		Dshi_3388	0.13	-0.9
3,566,790	+		Dshi_3388	0.13	-0.4
3,566,810	+		Dshi_3388	0.15	-0.9
3,566,845	-		Dshi_3388	0.17	+0.4
3,566,857	-		Dshi_3388	0.18	+0.5
3,566,872	+		Dshi_3388	0.19	+1.1
3,566,872	+		Dshi_3388	0.19	+0.6
3,566,890	-		Dshi_3388	0.20	-0.2
3,567,004	-		Dshi_3388	0.28	+0.2
3,567,022	+		Dshi_3388	0.29	+0.5
3,567,023	+		Dshi_3388	0.29	+0.6
3,567,035	-		Dshi_3388	0.30	+0.7
3,567,048	+		Dshi_3388	0.30	+2.8
3,567,048	+		Dshi_3388	0.30	+2.0
3,567,061	-		Dshi_3388	0.31	+0.1
3,567,097	+		Dshi_3388	0.34	-2.0
3,567,110	+		Dshi_3388	0.34	-1.7
3,567,118	-		Dshi_3388	0.35	-1.3
3,567,150	-		Dshi_3388	0.37	-0.4
3,567,170	-		Dshi_3388	0.38	+1.0
3,567,191	-		Dshi_3388	0.40	-0.3
3,567,212	-		Dshi_3388	0.41	-0.5
3,567,232	+		Dshi_3388	0.42	+1.2
3,567,232	+		Dshi_3388	0.42	-2.0
3,567,240	-		Dshi_3388	0.43	-0.2
3,567,240	-		Dshi_3388	0.43	-0.4
3,567,240	-		Dshi_3388	0.43	-0.2
3,567,240	-		Dshi_3388	0.43	+0.6
3,567,240	-		Dshi_3388	0.43	-0.7
3,567,242	+		Dshi_3388	0.43	-2.0
3,567,244	+		Dshi_3388	0.43	+0.3
3,567,294	-		Dshi_3388	0.46	-0.1
3,567,296	-		Dshi_3388	0.47	+1.7
3,567,307	+		Dshi_3388	0.47	-0.4
3,567,307	+		Dshi_3388	0.47	-1.0
3,567,386	-		Dshi_3388	0.53	+0.5
3,567,417	+		Dshi_3388	0.55	+0.7
3,567,417	+		Dshi_3388	0.55	+0.3
3,567,447	+		Dshi_3388	0.57	+0.1
3,567,455	-		Dshi_3388	0.57	+0.1
3,567,528	+		Dshi_3388	0.62	+1.0
3,567,534	-		Dshi_3388	0.62	-0.3
3,567,553	-		Dshi_3388	0.63	+0.3
3,567,561	+		Dshi_3388	0.64	+0.8
3,567,561	+		Dshi_3388	0.64	+0.1
3,567,561	+		Dshi_3388	0.64	+1.2
3,567,569	-		Dshi_3388	0.65	-0.4
3,567,569	-		Dshi_3388	0.65	+0.0
3,567,608	+		Dshi_3388	0.67	-0.2
3,567,628	-		Dshi_3388	0.68	+0.5
3,567,641	+		Dshi_3388	0.69	-0.1
3,567,664	-		Dshi_3388	0.71	-0.1
3,567,675	+		Dshi_3388	0.71	+0.1
3,567,675	+		Dshi_3388	0.71	-0.2
3,567,678	-		Dshi_3388	0.72	+2.7
3,567,683	-		Dshi_3388	0.72	-0.2
3,567,713	+		Dshi_3388	0.74	+0.7
3,567,730	-		Dshi_3388	0.75	+0.0
3,567,768	+		Dshi_3388	0.78	-0.6
3,567,779	+		Dshi_3388	0.78	-1.0
3,567,786	+		Dshi_3388	0.79	+0.0
3,567,787	-		Dshi_3388	0.79	+0.9
3,567,847	+		Dshi_3388	0.83	+0.7
3,567,847	+		Dshi_3388	0.83	-0.0
3,567,847	+		Dshi_3388	0.83	-0.4
3,567,855	-		Dshi_3388	0.83	-0.0
3,567,855	-		Dshi_3388	0.83	-0.3
3,567,907	-		Dshi_3388	0.87	-0.5
3,567,909	+		Dshi_3388	0.87	-2.4
3,567,916	+		Dshi_3388	0.87	+0.1
3,567,916	+		Dshi_3388	0.87	-0.1
3,567,917	-		Dshi_3388	0.87	-0.2
3,567,917	-		Dshi_3388	0.87	-0.6
3,567,917	-		Dshi_3388	0.87	+1.1
3,567,917	-		Dshi_3388	0.87	+0.7
3,567,925	-		Dshi_3388	0.88	-0.8
3,567,959	-				+0.8
3,568,035	+				-0.2
3,568,035	+				-0.0
3,568,035	+				+1.4
3,568,035	+				+0.5
3,568,035	+				+1.5
3,568,035	+				+0.1
3,568,035	+				-0.2
3,568,045	+				+0.4
3,568,045	+				+0.4
3,568,062	+				-0.2
3,568,064	+				+0.3
3,568,087	+				+4.6
3,568,087	+				+0.4
3,568,117	-				-0.3
3,568,128	+				+0.2
3,568,153	-				-0.5
3,568,166	+				+1.1
3,568,166	+				-0.4
3,568,174	-				+0.4
3,568,174	-				-0.3
3,568,181	+				-0.1
3,568,181	+				-0.2
3,568,181	+				-0.6
3,568,181	+				-0.1
3,568,181	+				-0.2
3,568,184	-				+0.1
3,568,189	-				-0.1
3,568,189	-				+0.1
3,568,189	-				+0.2
3,568,189	-				-0.5
3,568,189	-				+1.1
3,568,189	-				-0.3
3,568,191	+				-0.5
3,568,191	+				-0.3
3,568,214	-				+1.4
3,568,219	+				+0.0
3,568,229	+				-1.7
3,568,229	+				-1.8
3,568,232	-				-0.8
3,568,248	-		Dshi_3389	0.11	+1.6
3,568,384	+		Dshi_3389	0.27	-0.2
3,568,425	+		Dshi_3389	0.32	+0.0
3,568,425	+		Dshi_3389	0.32	+0.1
3,568,425	+		Dshi_3389	0.32	-0.5
3,568,425	+		Dshi_3389	0.32	+1.4
3,568,425	+		Dshi_3389	0.32	+0.0
3,568,427	-		Dshi_3389	0.32	-0.4
3,568,433	-		Dshi_3389	0.33	+0.7
3,568,433	-		Dshi_3389	0.33	+0.4
3,568,433	-		Dshi_3389	0.33	+1.0
3,568,433	-		Dshi_3389	0.33	-0.2
3,568,433	-		Dshi_3389	0.33	-1.7
3,568,433	-		Dshi_3389	0.33	+0.9
3,568,433	-		Dshi_3389	0.33	+0.8
3,568,433	-		Dshi_3389	0.33	+0.9
3,568,433	-		Dshi_3389	0.33	-1.8
3,568,433	-		Dshi_3389	0.33	-1.9
3,568,452	+		Dshi_3389	0.35	-0.4
3,568,452	+		Dshi_3389	0.35	+0.4
3,568,452	+		Dshi_3389	0.35	-0.0
3,568,452	+		Dshi_3389	0.35	+1.0
3,568,452	+		Dshi_3389	0.35	+1.3
3,568,460	-		Dshi_3389	0.36	-1.2
3,568,460	-		Dshi_3389	0.36	-1.0
3,568,460	-		Dshi_3389	0.36	+0.1
3,568,460	-		Dshi_3389	0.36	-1.0
3,568,472	-		Dshi_3389	0.38	-0.1
3,568,476	-		Dshi_3389	0.38	-0.6
3,568,516	+		Dshi_3389	0.43	+0.9
3,568,540	+		Dshi_3389	0.46	+0.2
3,568,578	-		Dshi_3389	0.51	-0.8
3,568,612	+		Dshi_3389	0.55	-0.6
3,568,612	+		Dshi_3389	0.55	+0.4
3,568,612	+		Dshi_3389	0.55	+1.1
3,568,620	-		Dshi_3389	0.56	-0.6
3,568,620	-		Dshi_3389	0.56	-0.8
3,568,620	-		Dshi_3389	0.56	+0.5
3,568,620	-		Dshi_3389	0.56	+1.3
3,568,620	-		Dshi_3389	0.56	+1.5
3,568,620	-		Dshi_3389	0.56	+1.7
3,568,620	-		Dshi_3389	0.56	-0.8
3,568,637	-		Dshi_3389	0.58	+3.7
3,568,639	+		Dshi_3389	0.58	-0.1
3,568,645	+		Dshi_3389	0.59	-0.2
3,568,672	+		Dshi_3389	0.62	+0.5
3,568,679	+		Dshi_3389	0.63	-0.8
3,568,684	+		Dshi_3389	0.63	+0.1
3,568,687	-		Dshi_3389	0.64	-0.1
3,568,692	-		Dshi_3389	0.64	-0.9
3,568,692	-		Dshi_3389	0.64	-0.1
3,568,692	-		Dshi_3389	0.64	+0.7
3,568,692	-		Dshi_3389	0.64	-2.3
3,568,702	-		Dshi_3389	0.65	+1.0
3,568,789	+		Dshi_3389	0.76	+0.2
3,568,825	-		Dshi_3389	0.80	+3.7
3,568,828	+		Dshi_3389	0.81	-0.4
3,568,835	-		Dshi_3389	0.81	-0.6
3,568,856	-		Dshi_3389	0.84	-0.0
3,568,866	+		Dshi_3389	0.85	-0.9
3,568,866	+		Dshi_3389	0.85	+1.6
3,568,874	-		Dshi_3389	0.86	-0.7
3,568,874	-		Dshi_3389	0.86	+0.6
3,568,904	-		Dshi_3389	0.90	+2.2
3,568,907	-				-0.5
3,568,908	+				+1.9
3,568,908	+				+0.4
3,568,908	+				-0.5
3,568,909	-				+0.1
3,568,909	-				+1.1
3,568,910	+				+0.9
3,568,916	-				+1.7
3,568,916	-				+0.2
3,568,922	+				+0.5
3,568,959	-				+0.3
3,568,962	+				+0.3
3,568,962	+				+1.0
3,568,963	-				+2.4
3,568,970	-				+0.7
3,569,035	+				+0.1
3,569,038	-				-0.2
3,569,041	+				-0.1
3,569,064	+		Dshi_3390	0.10	+0.6
3,569,069	-		Dshi_3390	0.11	+0.3
3,569,072	-		Dshi_3390	0.11	+0.3
3,569,072	-		Dshi_3390	0.11	+0.5
3,569,072	-		Dshi_3390	0.11	-0.4
3,569,072	-		Dshi_3390	0.11	-1.3
3,569,102	-		Dshi_3390	0.15	+1.9
3,569,104	+		Dshi_3390	0.16	-0.6