Experiment: m.b. Cobalt chloride 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_3101 and Dshi_3102 overlap by 4 nucleotides Dshi_3102 and Dshi_3103 are separated by 7 nucleotides Dshi_3103 and Dshi_3104 are separated by 1 nucleotides Dshi_3104 and Dshi_3105 overlap by 4 nucleotides
Dshi_3101: Dshi_3101 - OmpA/MotB domain protein (RefSeq), at 3,268,262 to 3,270,115
_3101
Dshi_3102: Dshi_3102 - hypothetical protein (RefSeq), at 3,270,112 to 3,270,444
_3102
Dshi_3103: Dshi_3103 - molybdopterin biosynthesis MoaE protein (RefSeq), at 3,270,452 to 3,270,895
_3103
Dshi_3104: Dshi_3104 - molybdopterin converting factor, subunit 1 (RefSeq), at 3,270,897 to 3,271,148
_3104
Dshi_3105: Dshi_3105 - CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (RefSeq), at 3,271,145 to 3,271,810
_3105
Position (kb) 3270
3271 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 3269.335 kb on + strand, within Dshi_3101 at 3270.176 kb on + strand, within Dshi_3102 at 3270.394 kb on + strand, within Dshi_3102 at 3270.395 kb on + strand, within Dshi_3102 at 3270.823 kb on - strand, within Dshi_3103 at 3271.101 kb on + strand, within Dshi_3104
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.5 mM remove 3,269,335 + Dshi_3101 0.58 -1.1 3,270,176 + Dshi_3102 0.19 -1.1 3,270,394 + Dshi_3102 0.85 +1.5 3,270,395 + Dshi_3102 0.85 +2.1 3,270,823 - Dshi_3103 0.84 -2.9 3,271,101 + Dshi_3104 0.81 -0.8
Or see this region's nucleotide sequence