Experiment: m.b. Cobalt chloride 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_2917 and Dshi_2918 are separated by 28 nucleotides Dshi_2918 and Dshi_2919 are separated by 169 nucleotides Dshi_2919 and Dshi_2920 are separated by 43 nucleotides Dshi_2920 and Dshi_2921 are separated by 376 nucleotides
Dshi_2917: Dshi_2917 - amidohydrolase (RefSeq), at 3,075,327 to 3,076,484
_2917
Dshi_2918: Dshi_2918 - GCN5-related N-acetyltransferase (RefSeq), at 3,076,513 to 3,077,004
_2918
Dshi_2919: Dshi_2919 - chaperonin GroEL (RefSeq), at 3,077,174 to 3,078,817
_2919
Dshi_2920: Dshi_2920 - chaperonin Cpn10 (RefSeq), at 3,078,861 to 3,079,172
_2920
Dshi_2921: Dshi_2921 - hypothetical protein (RefSeq), at 3,079,549 to 3,080,532
_2921
Position (kb)
3077
3078
3079 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 3076.188 kb on - strand, within Dshi_2917 at 3076.283 kb on + strand, within Dshi_2917 at 3076.729 kb on + strand, within Dshi_2918 at 3076.866 kb on + strand, within Dshi_2918 at 3076.874 kb on - strand, within Dshi_2918 at 3077.045 kb on - strand at 3079.370 kb on + strand at 3079.381 kb on + strand at 3079.386 kb on + strand at 3079.392 kb on + strand at 3079.405 kb on - strand at 3079.405 kb on - strand at 3079.405 kb on - strand at 3079.414 kb on + strand at 3079.422 kb on - strand at 3079.565 kb on + strand at 3079.565 kb on + strand at 3079.565 kb on + strand at 3079.565 kb on + strand at 3079.565 kb on + strand at 3079.565 kb on + strand at 3079.565 kb on + strand at 3079.565 kb on + strand at 3079.573 kb on - strand at 3079.573 kb on - strand at 3079.573 kb on - strand at 3079.573 kb on - strand at 3079.573 kb on - strand at 3079.573 kb on - strand at 3079.573 kb on - strand at 3079.573 kb on - strand at 3079.575 kb on + strand at 3079.665 kb on + strand, within Dshi_2921 at 3079.679 kb on + strand, within Dshi_2921 at 3079.720 kb on + strand, within Dshi_2921 at 3079.726 kb on - strand, within Dshi_2921 at 3079.740 kb on + strand, within Dshi_2921 at 3079.747 kb on - strand, within Dshi_2921 at 3079.747 kb on - strand, within Dshi_2921 at 3079.747 kb on - strand, within Dshi_2921 at 3079.751 kb on + strand, within Dshi_2921 at 3079.754 kb on - strand, within Dshi_2921 at 3079.754 kb on - strand, within Dshi_2921 at 3079.774 kb on + strand, within Dshi_2921 at 3079.799 kb on + strand, within Dshi_2921
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.5 mM remove 3,076,188 - Dshi_2917 0.74 -3.3 3,076,283 + Dshi_2917 0.83 -0.8 3,076,729 + Dshi_2918 0.44 +0.5 3,076,866 + Dshi_2918 0.72 +1.5 3,076,874 - Dshi_2918 0.73 -1.1 3,077,045 - -0.5 3,079,370 + +0.5 3,079,381 + -1.1 3,079,386 + -2.8 3,079,392 + +0.5 3,079,405 - +1.5 3,079,405 - +2.8 3,079,405 - +0.5 3,079,414 + +2.1 3,079,422 - -0.6 3,079,565 + -0.5 3,079,565 + -1.2 3,079,565 + +1.5 3,079,565 + -0.8 3,079,565 + -1.8 3,079,565 + -0.5 3,079,565 + -3.1 3,079,565 + +0.7 3,079,573 - +0.1 3,079,573 - +0.5 3,079,573 - -2.6 3,079,573 - -0.7 3,079,573 - +0.5 3,079,573 - +0.5 3,079,573 - -0.1 3,079,573 - -0.7 3,079,575 + -2.5 3,079,665 + Dshi_2921 0.12 +2.5 3,079,679 + Dshi_2921 0.13 +0.9 3,079,720 + Dshi_2921 0.17 -1.2 3,079,726 - Dshi_2921 0.18 +2.5 3,079,740 + Dshi_2921 0.19 -2.5 3,079,747 - Dshi_2921 0.20 -0.5 3,079,747 - Dshi_2921 0.20 -0.6 3,079,747 - Dshi_2921 0.20 -1.3 3,079,751 + Dshi_2921 0.21 +0.5 3,079,754 - Dshi_2921 0.21 +0.3 3,079,754 - Dshi_2921 0.21 -1.9 3,079,774 + Dshi_2921 0.23 -2.8 3,079,799 + Dshi_2921 0.25 +0.5
Or see this region's nucleotide sequence