Experiment: m.b. Cobalt chloride 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_2911 and Dshi_2912 are separated by 24 nucleotides Dshi_2912 and Dshi_2913 are separated by 133 nucleotides Dshi_2913 and Dshi_2914 are separated by 54 nucleotides Dshi_2914 and Dshi_2915 are separated by 75 nucleotides
Dshi_2911: Dshi_2911 - hypothetical protein (RefSeq), at 3,070,889 to 3,071,575
_2911
Dshi_2912: Dshi_2912 - hypothetical protein (RefSeq), at 3,071,600 to 3,071,788
_2912
Dshi_2913: Dshi_2913 - ABC transporter related (RefSeq), at 3,071,922 to 3,072,887
_2913
Dshi_2914: Dshi_2914 - lipase, putative (RefSeq), at 3,072,942 to 3,073,709
_2914
Dshi_2915: Dshi_2915 - NUDIX hydrolase (RefSeq), at 3,073,785 to 3,074,231
_2915
Position (kb)
3071
3072
3073 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 3070.957 kb on + strand at 3070.960 kb on - strand, within Dshi_2911 at 3070.975 kb on - strand, within Dshi_2911 at 3071.015 kb on - strand, within Dshi_2911 at 3071.079 kb on - strand, within Dshi_2911 at 3071.087 kb on - strand, within Dshi_2911 at 3071.155 kb on + strand, within Dshi_2911 at 3071.179 kb on + strand, within Dshi_2911 at 3071.366 kb on + strand, within Dshi_2911 at 3071.408 kb on + strand, within Dshi_2911 at 3071.573 kb on + strand at 3071.723 kb on + strand, within Dshi_2912 at 3071.784 kb on + strand at 3071.840 kb on - strand at 3071.843 kb on + strand at 3071.847 kb on - strand at 3071.851 kb on - strand at 3071.851 kb on - strand at 3071.851 kb on - strand at 3071.929 kb on + strand at 3071.934 kb on + strand at 3072.035 kb on + strand, within Dshi_2913 at 3072.149 kb on - strand, within Dshi_2913 at 3072.426 kb on - strand, within Dshi_2913 at 3072.429 kb on - strand, within Dshi_2913 at 3072.568 kb on - strand, within Dshi_2913 at 3072.616 kb on - strand, within Dshi_2913 at 3072.634 kb on - strand, within Dshi_2913 at 3072.858 kb on + strand at 3072.964 kb on + strand at 3073.091 kb on + strand, within Dshi_2914 at 3073.143 kb on - strand, within Dshi_2914 at 3073.150 kb on + strand, within Dshi_2914 at 3073.158 kb on - strand, within Dshi_2914 at 3073.269 kb on + strand at 3073.516 kb on + strand, within Dshi_2914 at 3073.562 kb on + strand, within Dshi_2914 at 3073.623 kb on - strand, within Dshi_2914 at 3073.781 kb on + strand at 3073.802 kb on - strand at 3073.802 kb on - strand at 3073.843 kb on - strand, within Dshi_2915
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.5 mM remove 3,070,957 + -0.7 3,070,960 - Dshi_2911 0.10 +0.5 3,070,975 - Dshi_2911 0.13 -0.3 3,071,015 - Dshi_2911 0.18 -1.5 3,071,079 - Dshi_2911 0.28 -1.3 3,071,087 - Dshi_2911 0.29 -0.5 3,071,155 + Dshi_2911 0.39 +1.5 3,071,179 + Dshi_2911 0.42 -1.9 3,071,366 + Dshi_2911 0.69 +0.5 3,071,408 + Dshi_2911 0.76 -1.8 3,071,573 + +0.5 3,071,723 + Dshi_2912 0.65 +0.5 3,071,784 + -1.5 3,071,840 - +0.5 3,071,843 + -2.3 3,071,847 - +1.3 3,071,851 - +0.5 3,071,851 - +3.1 3,071,851 - -2.6 3,071,929 + -0.8 3,071,934 + +0.5 3,072,035 + Dshi_2913 0.12 -1.6 3,072,149 - Dshi_2913 0.23 +0.5 3,072,426 - Dshi_2913 0.52 -2.5 3,072,429 - Dshi_2913 0.52 -1.4 3,072,568 - Dshi_2913 0.67 -2.3 3,072,616 - Dshi_2913 0.72 +0.5 3,072,634 - Dshi_2913 0.74 +1.5 3,072,858 + +0.5 3,072,964 + +0.5 3,073,091 + Dshi_2914 0.19 +0.9 3,073,143 - Dshi_2914 0.26 -2.3 3,073,150 + Dshi_2914 0.27 -0.9 3,073,158 - Dshi_2914 0.28 -0.0 3,073,269 + +0.5 3,073,516 + Dshi_2914 0.75 -2.5 3,073,562 + Dshi_2914 0.81 -2.5 3,073,623 - Dshi_2914 0.89 -1.6 3,073,781 + -2.1 3,073,802 - -0.5 3,073,802 - +2.1 3,073,843 - Dshi_2915 0.13 -3.3
Or see this region's nucleotide sequence