Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_2503

Experiment: m.b. Cobalt chloride 0.5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Cobalt chloride 0.5 mM
2,660,450	-		Dshi_2502	0.38	-0.6
2,660,479	+		Dshi_2502	0.41	+0.1
2,660,518	+				+0.3
2,660,518	+		Dshi_2502	0.43	+1.0
2,660,518	+		Dshi_2502	0.43	-0.8
2,660,526	-		Dshi_2502	0.44	-3.7
2,660,526	-		Dshi_2502	0.44	-1.3
2,660,582	+		Dshi_2502	0.48	-0.5
2,660,582	+		Dshi_2502	0.48	-1.0
2,660,630	-		Dshi_2502	0.52	-2.0
2,660,654	+		Dshi_2502	0.54	-0.7
2,660,672	-		Dshi_2502	0.55	-2.5
2,660,825	+		Dshi_2502	0.67	-1.5
2,660,825	+		Dshi_2502	0.67	-1.5
2,660,861	+		Dshi_2502	0.69	-0.7
2,660,984	+		Dshi_2502	0.79	-1.2
2,660,984	+		Dshi_2502	0.79	-2.0
2,661,031	+		Dshi_2502	0.82	+1.3
2,661,031	+		Dshi_2502	0.82	-0.5
2,661,120	+		Dshi_2502	0.89	-1.7
2,661,120	-		Dshi_2502	0.89	-0.7
2,661,133	+				+0.0
2,661,141	-				+0.3
2,661,141	-				-2.7
2,661,141	-				+0.3
2,661,201	+				+0.7
2,661,209	-				-0.7
2,661,209	-				-0.5
2,661,215	+				-1.0
2,661,293	+				+0.5
2,661,347	+				+1.1
2,661,373	-				+1.5
2,661,378	+				+0.7
2,661,461	-				+0.8
2,661,470	-				-2.7
2,661,623	+				-0.8
2,661,635	-				+2.0
2,661,669	+				-0.2
2,661,743	-				-2.7
2,661,845	+				-1.2
2,662,092	+		Dshi_2503	0.11	-0.2
2,662,107	+		Dshi_2503	0.11	-2.2
2,662,116	-		Dshi_2503	0.11	+1.0
2,662,160	+		Dshi_2503	0.12	-0.7
2,662,170	-		Dshi_2503	0.12	-1.7
2,662,172	-		Dshi_2503	0.12	-0.6
2,662,283	-		Dshi_2503	0.14	+0.7
2,662,296	+		Dshi_2503	0.14	+1.5
2,662,310	+		Dshi_2503	0.14	+0.4
2,662,318	-		Dshi_2503	0.14	-1.1
2,662,441	+		Dshi_2503	0.16	+2.3
2,662,465	-		Dshi_2503	0.16	-2.0
2,662,621	-		Dshi_2503	0.18	-0.2
2,662,695	+		Dshi_2503	0.19	-0.1
2,662,728	+		Dshi_2503	0.20	-0.0
2,662,730	+		Dshi_2503	0.20	-1.2
2,662,800	+		Dshi_2503	0.21	-0.7
2,662,853	-		Dshi_2503	0.21	-0.0
2,662,910	-		Dshi_2503	0.22	-1.0
2,663,073	+		Dshi_2503	0.24	-2.3
2,663,076	+		Dshi_2503	0.24	+0.3
2,663,084	-		Dshi_2503	0.24	-0.0
2,663,122	-		Dshi_2503	0.25	+1.7
2,663,178	+		Dshi_2503	0.26	+0.1
2,663,178	-		Dshi_2503	0.26	-2.9
2,663,185	-		Dshi_2503	0.26	-0.0
2,663,187	+		Dshi_2503	0.26	+0.9
2,663,187	+		Dshi_2503	0.26	+2.3
2,663,195	-		Dshi_2503	0.26	-0.8
2,663,195	-		Dshi_2503	0.26	+0.7
2,663,195	-		Dshi_2503	0.26	+0.2
2,663,202	-		Dshi_2503	0.26	-0.4
2,663,261	-		Dshi_2503	0.27	-3.3
2,663,336	+		Dshi_2503	0.28	+1.1
2,663,355	-		Dshi_2503	0.28	-0.9
2,663,406	+		Dshi_2503	0.29	-0.3
2,663,406	+		Dshi_2503	0.29	+0.8
2,663,406	+		Dshi_2503	0.29	+0.6
2,663,577	+		Dshi_2503	0.31	-0.4
2,663,585	-		Dshi_2503	0.31	-1.0
2,663,633	-		Dshi_2503	0.32	-0.1
2,663,633	-		Dshi_2503	0.32	-2.5
2,663,640	-		Dshi_2503	0.32	+0.3
2,663,665	+		Dshi_2503	0.32	+0.8
2,663,680	+		Dshi_2503	0.32	-0.7
2,663,851	-		Dshi_2503	0.35	-0.4
2,663,853	-		Dshi_2503	0.35	-2.3
2,663,969	+		Dshi_2503	0.36	-1.6
2,664,063	+		Dshi_2503	0.37	-0.3
2,664,141	-		Dshi_2503	0.38	-1.0
2,664,175	+		Dshi_2503	0.39	+0.3
2,664,210	+		Dshi_2503	0.39	-0.4
2,664,218	-		Dshi_2503	0.39	-0.9
2,664,218	-		Dshi_2503	0.39	+0.4
2,664,254	+		Dshi_2503	0.40	+0.6
2,664,308	-		Dshi_2503	0.41	-0.5
2,664,308	-		Dshi_2503	0.41	-1.1
2,664,332	+		Dshi_2503	0.41	-0.2
2,664,365	-		Dshi_2503	0.41	-0.4
2,664,399	-		Dshi_2503	0.42	-0.7
2,664,409	-		Dshi_2503	0.42	-1.6
2,664,421	+		Dshi_2503	0.42	-0.5
2,664,441	+		Dshi_2503	0.42	-1.0
2,664,451	+		Dshi_2503	0.43	-0.3
2,664,461	+		Dshi_2503	0.43	-0.7
2,664,461	+		Dshi_2503	0.43	-0.3
2,664,461	+		Dshi_2503	0.43	+2.3
2,664,469	-		Dshi_2503	0.43	-0.6
2,664,469	-		Dshi_2503	0.43	-0.2
2,664,469	-		Dshi_2503	0.43	-1.2
2,664,469	-		Dshi_2503	0.43	+0.4
2,664,479	-		Dshi_2503	0.43	-1.2
2,664,534	+		Dshi_2503	0.44	-0.0
2,664,584	+		Dshi_2503	0.44	-1.5
2,664,617	-		Dshi_2503	0.45	-0.6
2,664,623	-		Dshi_2503	0.45	-3.3
2,664,623	-		Dshi_2503	0.45	-0.5
2,664,694	-		Dshi_2503	0.46	-1.9
2,664,697	+		Dshi_2503	0.46	+0.9
2,664,708	+		Dshi_2503	0.46	-1.8
2,664,797	+		Dshi_2503	0.47	-0.1
2,664,818	+		Dshi_2503	0.48	-0.9
2,664,826	-		Dshi_2503	0.48	+1.3
2,664,871	-		Dshi_2503	0.48	-3.2
2,664,878	+		Dshi_2503	0.48	+2.9
2,664,879	-		Dshi_2503	0.48	-0.6
2,664,936	+		Dshi_2503	0.49	-0.4
2,664,944	-		Dshi_2503	0.49	+3.4
2,665,003	-		Dshi_2503	0.50	-0.6
2,665,008	+		Dshi_2503	0.50	-2.2
2,665,030	+		Dshi_2503	0.50	+0.4
2,665,035	+		Dshi_2503	0.50	-0.9
2,665,045	+		Dshi_2503	0.51	+0.3
2,665,098	+		Dshi_2503	0.51	+1.3
2,665,135	-		Dshi_2503	0.52	-2.0
2,665,164	+		Dshi_2503	0.52	-3.1
2,665,276	-		Dshi_2503	0.54	-0.9
2,665,289	+		Dshi_2503	0.54	-0.3
2,665,289	+		Dshi_2503	0.54	-1.3
2,665,415	-		Dshi_2503	0.56	+0.1
2,665,416	-		Dshi_2503	0.56	+0.0
2,665,446	+		Dshi_2503	0.56	-0.3
2,665,450	+		Dshi_2503	0.56	+0.5
2,665,454	-		Dshi_2503	0.56	-0.4
2,665,454	-		Dshi_2503	0.56	-1.3
2,665,465	-		Dshi_2503	0.56	+2.3
2,665,549	+		Dshi_2503	0.57	+0.1
2,665,568	-		Dshi_2503	0.58	-2.0
2,665,578	-		Dshi_2503	0.58	-0.8
2,665,580	-		Dshi_2503	0.58	-0.7
2,665,650	-		Dshi_2503	0.59	+1.0
2,665,653	+		Dshi_2503	0.59	+0.3
2,665,719	-		Dshi_2503	0.60	+0.2
2,665,751	+		Dshi_2503	0.60	-0.5
2,665,843	+		Dshi_2503	0.61	-0.7
2,665,851	-		Dshi_2503	0.61	-0.2
2,665,904	-		Dshi_2503	0.62	-0.7
2,665,904	-		Dshi_2503	0.62	-1.7
2,665,942	-		Dshi_2503	0.63	+0.1
2,666,129	-		Dshi_2503	0.65	-1.2
2,666,322	+		Dshi_2503	0.68	+1.6
2,666,323	+		Dshi_2503	0.68	-0.5
2,666,325	-		Dshi_2503	0.68	-0.4
2,666,386	+		Dshi_2503	0.69	+0.3
2,666,386	+		Dshi_2503	0.69	-1.5
2,666,464	-		Dshi_2503	0.70	+2.3
2,666,499	+		Dshi_2503	0.70	+0.0
2,666,507	-		Dshi_2503	0.70	-0.1
2,666,507	-		Dshi_2503	0.70	-0.1
2,666,509	+		Dshi_2503	0.70	+0.6
2,666,590	-		Dshi_2503	0.71	-1.9
2,666,590	-		Dshi_2503	0.71	+0.0
2,666,606	-		Dshi_2503	0.71	+1.3
2,666,703	-		Dshi_2503	0.73	-0.5
2,666,777	-		Dshi_2503	0.74	+0.3
2,666,796	-		Dshi_2503	0.74	-0.7
2,666,855	-		Dshi_2503	0.75	-0.6
2,666,865	-		Dshi_2503	0.75	-1.2
2,666,927	-		Dshi_2503	0.76	+0.1
2,666,927	-		Dshi_2503	0.76	+1.6
2,666,953	-		Dshi_2503	0.76	-1.5
2,667,072	+		Dshi_2503	0.78	-2.5
2,667,072	+		Dshi_2503	0.78	+0.6
2,667,072	+		Dshi_2503	0.78	+1.2
2,667,072	+		Dshi_2503	0.78	-0.3
2,667,080	-		Dshi_2503	0.78	-0.1
2,667,087	-		Dshi_2503	0.78	+0.1
2,667,333	+		Dshi_2503	0.81	+0.4
2,667,337	+		Dshi_2503	0.81	-1.1
2,667,398	-		Dshi_2503	0.82	-1.1
2,667,434	+		Dshi_2503	0.83	+0.1
2,667,528	+		Dshi_2503	0.84	-0.2
2,667,534	+		Dshi_2503	0.84	-1.5
2,667,563	+		Dshi_2503	0.84	-0.6
2,667,610	-		Dshi_2503	0.85	-0.6
2,667,642	+		Dshi_2503	0.85	+1.3
2,667,688	+		Dshi_2503	0.86	+0.3
2,667,697	-		Dshi_2503	0.86	-1.2
2,667,712	+		Dshi_2503	0.86	+2.7
2,667,743	+		Dshi_2503	0.87	+0.6
2,667,770	+		Dshi_2503	0.87	-1.1
2,667,778	+		Dshi_2503	0.87	-0.7
2,667,823	+		Dshi_2503	0.88	-0.4
2,667,823	+		Dshi_2503	0.88	-0.2
2,667,828	+		Dshi_2503	0.88	-0.1
2,667,828	+		Dshi_2503	0.88	+0.6
2,667,831	-		Dshi_2503	0.88	-0.1
2,667,831	-		Dshi_2503	0.88	-0.4
2,667,973	-		Dshi_2503	0.90	-2.3
2,667,993	+				-0.9
2,668,000	-				-0.1
2,668,012	-				-2.0
2,668,066	-				-0.0
2,668,082	+				+1.6
2,668,095	-				+0.5
2,668,105	+				+0.1
2,668,193	+				-0.7
2,668,198	+				+0.3
2,668,204	-				-0.9
2,668,209	+				-1.5
2,668,209	+				+1.0
2,668,218	-				-0.3
2,668,229	-				-0.8
2,668,278	-				-0.7
2,668,285	-				+0.1
2,668,304	-				-1.3
2,668,331	+				-1.0
2,668,367	+				-0.3
2,668,437	+				-0.5
2,668,445	+				-1.4
2,668,446	-				-0.8
2,668,544	+				+1.1
2,668,544	+				+0.0
2,668,559	+				+0.0
2,668,563	+				-4.1
2,668,568	+				-0.8
2,668,576	-				+1.0
2,668,584	-				-0.7
2,668,611	+				+1.3
2,668,621	-				-1.0
2,668,630	-				-0.7
2,668,632	+				-0.5
2,668,632	+				+1.3
2,668,635	+				-0.1
2,668,637	+				+0.4
2,668,637	+				+0.5
2,668,637	+				+0.3
2,668,637	+				-0.8
2,668,640	-				-0.2
2,668,642	+				-0.1
2,668,652	-				-2.5
2,668,652	-				+0.9
2,668,670	+				+0.3
2,668,670	+				+2.3
2,668,678	-				-2.2
2,668,678	-				-0.2
2,668,678	-				-2.7
2,668,750	+				+0.3
2,668,772	-				-0.9
2,668,772	-				-0.8
2,668,779	+				-3.3
2,668,779	+				-2.3
2,668,779	+				-0.0
2,668,779	+				-0.5
2,668,779	+				-1.7
2,668,779	+				-0.8
2,668,779	+				-1.5
2,668,787	-				-1.6
2,668,788	-				-0.1
2,668,788	-				-1.7
2,668,788	-				+1.1
2,668,788	-				-2.4
2,668,788	-				-1.3
2,668,788	-				-1.3
2,668,788	-				-0.3
2,668,825	-				-1.4
2,668,834	+				-0.1
2,668,842	-				-4.5
2,668,842	-				+0.6
2,668,842	-				-1.0
2,668,848	-				-1.5
2,668,874	+				+4.5
2,668,877	-				-0.5
2,668,879	+				+0.3
2,668,883	+				+0.3
2,668,883	+				-0.0
2,668,884	+				+1.4
2,668,887	-				-0.3
2,668,888	+				+0.1
2,668,890	+				-0.4
2,668,891	-				-0.7
2,668,893	+				-0.5
2,668,898	-				-2.1
2,668,898	-				-0.8
2,668,901	-				-1.1
2,669,014	-				-0.7
2,669,014	-				+0.5
2,669,014	-				+0.1
2,669,037	-		Dshi_2504	0.11	-0.4
2,669,054	-		Dshi_2504	0.12	+0.5
2,669,142	+		Dshi_2504	0.19	-0.1
2,669,179	-		Dshi_2504	0.21	-0.5
2,669,207	+		Dshi_2504	0.24	+0.6
2,669,215	-		Dshi_2504	0.24	+0.5
2,669,215	-		Dshi_2504	0.24	-1.0
2,669,215	-		Dshi_2504	0.24	-0.5
2,669,216	-		Dshi_2504	0.24	-1.0
2,669,234	+		Dshi_2504	0.26	-0.1
2,669,251	+		Dshi_2504	0.27	+1.1
2,669,251	+		Dshi_2504	0.27	-0.5
2,669,259	-		Dshi_2504	0.27	-0.4
2,669,259	-		Dshi_2504	0.27	-0.8
2,669,259	-		Dshi_2504	0.27	-0.3
2,669,259	-		Dshi_2504	0.27	-0.2
2,669,259	-		Dshi_2504	0.27	-0.2
2,669,301	+		Dshi_2504	0.31	-0.8
2,669,309	-		Dshi_2504	0.31	+0.0
2,669,360	+		Dshi_2504	0.35	-0.5
2,669,361	+		Dshi_2504	0.35	+1.9
2,669,361	+		Dshi_2504	0.35	+0.5
2,669,368	-		Dshi_2504	0.35	+2.3
2,669,388	+		Dshi_2504	0.37	-1.7
2,669,461	+		Dshi_2504	0.42	-2.2
2,669,469	-		Dshi_2504	0.43	+1.7
2,669,479	-		Dshi_2504	0.44	+0.5
2,669,507	+		Dshi_2504	0.46	+0.7
2,669,679	+		Dshi_2504	0.59	-1.3
2,669,687	-		Dshi_2504	0.59	+0.1
2,669,722	-		Dshi_2504	0.62	+0.1
2,669,724	+		Dshi_2504	0.62	+0.6