Experiment: m.b. Cobalt chloride 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_2392 and Dshi_2393 are separated by 232 nucleotides Dshi_2393 and Dshi_2394 are separated by 240 nucleotides Dshi_2394 and Dshi_2395 overlap by 4 nucleotides
Dshi_2392: Dshi_2392 - Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family (RefSeq), at 2,525,802 to 2,527,001
_2392
Dshi_2393: Dshi_2393 - aminotransferase family protein, putative (RefSeq), at 2,527,234 to 2,528,364
_2393
Dshi_2394: Dshi_2394 - transcriptional regulator, AsnC family (RefSeq), at 2,528,605 to 2,529,063
_2394
Dshi_2395: Dshi_2395 - transcriptional regulator, AsnC family (RefSeq), at 2,529,060 to 2,529,518
_2395
Position (kb)
2527
2528
2529 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2527.018 kb on - strand at 2527.237 kb on + strand at 2527.252 kb on - strand at 2527.465 kb on - strand, within Dshi_2393 at 2527.563 kb on - strand, within Dshi_2393 at 2527.685 kb on - strand, within Dshi_2393 at 2527.772 kb on + strand, within Dshi_2393 at 2527.872 kb on + strand, within Dshi_2393 at 2528.009 kb on + strand, within Dshi_2393 at 2528.231 kb on + strand, within Dshi_2393 at 2528.303 kb on - strand at 2528.310 kb on + strand at 2528.310 kb on - strand at 2528.313 kb on - strand at 2528.313 kb on - strand at 2528.345 kb on + strand at 2528.367 kb on - strand at 2528.381 kb on - strand at 2528.381 kb on - strand at 2528.552 kb on + strand at 2528.578 kb on + strand at 2529.038 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.5 mM remove 2,527,018 - -0.8 2,527,237 + -2.1 2,527,252 - +0.2 2,527,465 - Dshi_2393 0.20 -3.6 2,527,563 - Dshi_2393 0.29 +1.2 2,527,685 - Dshi_2393 0.40 -0.8 2,527,772 + Dshi_2393 0.48 +0.2 2,527,872 + Dshi_2393 0.56 +3.1 2,528,009 + Dshi_2393 0.69 -0.9 2,528,231 + Dshi_2393 0.88 -2.2 2,528,303 - -2.0 2,528,310 + -1.3 2,528,310 - -1.9 2,528,313 - -2.3 2,528,313 - +0.2 2,528,345 + +1.0 2,528,367 - +1.8 2,528,381 - -0.9 2,528,381 - -0.8 2,528,552 + -1.8 2,528,578 + -3.2 2,529,038 + -0.8
Or see this region's nucleotide sequence