Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_2196

Experiment: m.b. Cobalt chloride 0.5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Cobalt chloride 0.5 mM
2,322,065	+		Dshi_2194	0.55	-2.5
2,322,197	+		Dshi_2194	0.89	-3.0
2,322,197	+		Dshi_2194	0.89	+1.0
2,322,231	+				+1.0
2,322,236	+				-1.4
2,322,239	-				+0.2
2,322,257	-				+2.2
2,322,267	+				+1.2
2,322,277	+				-0.5
2,322,301	+				+1.5
2,322,301	+				-1.7
2,322,309	-				-2.1
2,322,390	+				-0.4
2,322,429	-				-3.8
2,322,458	+				-0.6
2,322,494	-				-4.2
2,322,566	-		Dshi_2195	0.43	-0.0
2,322,635	-				-0.4
2,322,658	-				-0.0
2,322,670	-				-0.1
2,322,684	-				+0.2
2,322,723	+				-3.2
2,322,736	-				-0.3
2,322,751	+				-0.9
2,322,797	-				-2.9
2,322,802	-				-0.5
2,322,805	+				-1.8
2,322,805	+				+0.5
2,322,805	+				-1.2
2,322,805	+				+0.2
2,322,813	-				+0.2
2,322,813	-				-0.6
2,322,813	-				+1.2
2,322,813	-				-1.4
2,322,818	-				-2.1
2,322,850	-				+0.2
2,322,880	-				-1.6
2,322,907	-				+0.5
2,322,911	+				-0.6
2,322,919	-				-1.3
2,322,919	-				+1.2
2,322,923	+				+0.5
2,322,923	+				+1.6
2,322,923	+				+0.3
2,322,923	+				+0.6
2,322,923	+				-2.7
2,322,923	+				+0.1
2,322,931	-				-4.5
2,322,931	-				-0.8
2,322,931	-				-0.8
2,322,931	-				-2.6
2,322,931	-				-2.4
2,322,931	-				-2.2
2,322,931	-				+0.2
2,322,931	-				+1.8
2,322,931	-				+0.2
2,322,931	-				+0.2
2,322,931	-				-0.1
2,322,934	+				+1.5
2,322,942	-				+1.4
2,322,948	+				-0.0
2,322,951	+				-0.8
2,322,951	-				-1.9
2,322,951	-				-1.8
2,322,956	-				-1.5
2,322,961	+				-2.1
2,322,961	+				+0.2
2,322,962	+				-0.7
2,322,962	+				+1.5
2,322,970	+				+2.5
2,322,970	+				-0.6
2,322,988	+				-1.1
2,323,005	+				+1.5
2,323,005	+				+0.7
2,323,022	+				-1.5
2,323,022	+				-2.7
2,323,022	+				-1.1
2,323,022	+				+0.2
2,323,022	+				-3.1
2,323,022	+				-0.8
2,323,022	+				-1.9
2,323,025	-				-1.9
2,323,029	-				-0.8
2,323,030	-				-1.5
2,323,030	-				-5.5
2,323,030	-				-1.4
2,323,030	-				+1.3
2,323,030	-				-2.8
2,323,032	+				-1.6
2,323,032	+				-1.5
2,323,032	+				-2.1
2,323,032	+				+0.2
2,323,037	-				-1.6
2,323,054	+				-0.4
2,323,054	+				+1.2
2,323,054	+				-2.0
2,323,054	+				+0.2
2,323,056	-				+1.2
2,323,062	-				-2.0
2,323,066	-				-1.8
2,323,096	+				-2.4
2,323,138	+		Dshi_2196	0.13	-0.3
2,323,147	+		Dshi_2196	0.14	-1.3
2,323,147	+		Dshi_2196	0.14	-1.7
2,323,155	-		Dshi_2196	0.14	-0.8
2,323,155	-		Dshi_2196	0.14	+0.2
2,323,155	-		Dshi_2196	0.14	-0.7
2,323,155	-				+0.2
2,323,157	+		Dshi_2196	0.15	+0.2
2,323,157	+		Dshi_2196	0.15	-0.9
2,323,157	+		Dshi_2196	0.15	+0.3
2,323,157	+		Dshi_2196	0.15	-0.4
2,323,157	+		Dshi_2196	0.15	-3.7
2,323,157	+		Dshi_2196	0.15	-2.1
2,323,157	+		Dshi_2196	0.15	-0.1
2,323,157	+		Dshi_2196	0.15	-1.1
2,323,157	+		Dshi_2196	0.15	+0.2
2,323,157	+		Dshi_2196	0.15	-1.2
2,323,157	+		Dshi_2196	0.15	-0.6
2,323,157	+		Dshi_2196	0.15	+2.5
2,323,157	+		Dshi_2196	0.15	-0.9
2,323,157	+		Dshi_2196	0.15	+2.5
2,323,157	+		Dshi_2196	0.15	-0.2
2,323,157	+		Dshi_2196	0.15	-1.3
2,323,157	+		Dshi_2196	0.15	-1.1
2,323,157	+		Dshi_2196	0.15	-1.1
2,323,157	+		Dshi_2196	0.15	-1.2
2,323,157	+		Dshi_2196	0.15	-1.0
2,323,165	-		Dshi_2196	0.15	-1.2
2,323,165	-		Dshi_2196	0.15	-0.4
2,323,165	-		Dshi_2196	0.15	-0.8
2,323,165	-		Dshi_2196	0.15	-1.8
2,323,165	-		Dshi_2196	0.15	+3.2
2,323,165	-		Dshi_2196	0.15	-2.8
2,323,165	-		Dshi_2196	0.15	-0.9
2,323,165	-		Dshi_2196	0.15	+0.6
2,323,165	-		Dshi_2196	0.15	+2.2
2,323,165	-		Dshi_2196	0.15	-0.5
2,323,165	-		Dshi_2196	0.15	+1.2
2,323,165	-		Dshi_2196	0.15	-1.9
2,323,165	-		Dshi_2196	0.15	-1.8
2,323,165	-		Dshi_2196	0.15	-0.3
2,323,165	-		Dshi_2196	0.15	+0.2
2,323,165	-		Dshi_2196	0.15	-1.2
2,323,165	-		Dshi_2196	0.15	-3.2
2,323,165	-		Dshi_2196	0.15	-1.4
2,323,165	-		Dshi_2196	0.15	-0.9
2,323,165	-		Dshi_2196	0.15	-2.4
2,323,165	-		Dshi_2196	0.15	-0.1
2,323,165	-		Dshi_2196	0.15	+1.2
2,323,165	-		Dshi_2196	0.15	-0.1
2,323,165	-		Dshi_2196	0.15	-0.4
2,323,165	-		Dshi_2196	0.15	-2.6
2,323,165	-		Dshi_2196	0.15	+0.2
2,323,165	-		Dshi_2196	0.15	-1.4
2,323,165	-		Dshi_2196	0.15	-0.4
2,323,165	-		Dshi_2196	0.15	-0.9
2,323,167	+		Dshi_2196	0.16	+2.2
2,323,175	-		Dshi_2196	0.16	-3.4
2,323,175	-		Dshi_2196	0.16	-1.4
2,323,175	-		Dshi_2196	0.16	-1.8
2,323,175	-		Dshi_2196	0.16	+0.3
2,323,175	-		Dshi_2196	0.16	-0.1
2,323,234	+				+0.2
2,323,270	+		Dshi_2196	0.26	+0.8
2,323,277	-		Dshi_2196	0.26	+0.2
2,323,312	+		Dshi_2196	0.30	-3.2
2,323,315	+		Dshi_2196	0.30	+0.3
2,323,325	+		Dshi_2196	0.31	-0.2
2,323,355	+		Dshi_2196	0.34	+0.2
2,323,364	+		Dshi_2196	0.35	+1.2
2,323,387	-		Dshi_2196	0.37	+1.1
2,323,394	-		Dshi_2196	0.38	-0.4
2,323,400	+		Dshi_2196	0.38	-1.6
2,323,400	+		Dshi_2196	0.38	-2.1
2,323,400	+		Dshi_2196	0.38	-1.1
2,323,406	-		Dshi_2196	0.39	+0.2
2,323,408	-		Dshi_2196	0.39	+1.4
2,323,409	+		Dshi_2196	0.39	-0.9
2,323,409	+		Dshi_2196	0.39	+1.5
2,323,409	+		Dshi_2196	0.39	-2.2
2,323,409	+		Dshi_2196	0.39	-2.6
2,323,409	+		Dshi_2196	0.39	+2.5
2,323,417	-		Dshi_2196	0.40	+0.2
2,323,477	+		Dshi_2196	0.46	-1.5
2,323,487	+		Dshi_2196	0.47	-2.6
2,323,492	+		Dshi_2196	0.47	-0.2
2,323,495	-		Dshi_2196	0.48	-1.2
2,323,495	-		Dshi_2196	0.48	-1.1
2,323,497	+		Dshi_2196	0.48	+0.2
2,323,500	-		Dshi_2196	0.48	+0.0
2,323,501	+		Dshi_2196	0.48	-1.6
2,323,501	+		Dshi_2196	0.48	+0.6
2,323,502	+		Dshi_2196	0.48	+0.5
2,323,502	+		Dshi_2196	0.48	-1.7
2,323,502	+		Dshi_2196	0.48	-0.4
2,323,502	+		Dshi_2196	0.48	+2.2
2,323,502	+		Dshi_2196	0.48	-0.6
2,323,502	+		Dshi_2196	0.48	-1.0
2,323,502	+		Dshi_2196	0.48	+1.7
2,323,502	+		Dshi_2196	0.48	-0.8
2,323,502	+		Dshi_2196	0.48	-1.9
2,323,505	-		Dshi_2196	0.49	-3.5
2,323,506	+		Dshi_2196	0.49	-2.1
2,323,506	+		Dshi_2196	0.49	-0.4
2,323,506	+		Dshi_2196	0.49	-1.6
2,323,506	+		Dshi_2196	0.49	-1.2
2,323,506	+		Dshi_2196	0.49	+0.2
2,323,507	+		Dshi_2196	0.49	-1.6
2,323,507	+		Dshi_2196	0.49	+0.2
2,323,507	+		Dshi_2196	0.49	+1.5
2,323,509	-		Dshi_2196	0.49	-0.2
2,323,509	-		Dshi_2196	0.49	+0.2
2,323,510	-		Dshi_2196	0.49	-0.8
2,323,510	-		Dshi_2196	0.49	-1.7
2,323,510	-		Dshi_2196	0.49	-1.1
2,323,514	+		Dshi_2196	0.50	+0.6
2,323,514	-		Dshi_2196	0.50	-2.0
2,323,514	-		Dshi_2196	0.50	-1.4
2,323,515	-		Dshi_2196	0.50	-0.1
2,323,515	-		Dshi_2196	0.50	-0.5
2,323,520	-		Dshi_2196	0.50	+1.5
2,323,524	-		Dshi_2196	0.51	+0.5
2,323,536	-		Dshi_2196	0.52	-2.0
2,323,537	-		Dshi_2196	0.52	+2.5
2,323,542	-		Dshi_2196	0.52	+0.7
2,323,542	-		Dshi_2196	0.52	+2.8
2,323,545	-		Dshi_2196	0.53	+0.2
2,323,545	-		Dshi_2196	0.53	+0.2
2,323,545	-		Dshi_2196	0.53	-2.4
2,323,545	-		Dshi_2196	0.53	-1.2
2,323,546	-		Dshi_2196	0.53	-2.1
2,323,547	+		Dshi_2196	0.53	+1.0
2,323,555	-		Dshi_2196	0.54	-0.7
2,323,555	-		Dshi_2196	0.54	-2.8
2,323,555	-		Dshi_2196	0.54	-1.7
2,323,565	-		Dshi_2196	0.55	-2.9
2,323,592	-		Dshi_2196	0.57	+0.4
2,323,596	+		Dshi_2196	0.58	+0.1
2,323,614	-		Dshi_2196	0.59	+0.6
2,323,614	-		Dshi_2196	0.59	-1.6
2,323,621	+		Dshi_2196	0.60	-0.9
2,323,635	+		Dshi_2196	0.61	-0.8
2,323,640	+		Dshi_2196	0.62	+1.0
2,323,660	-		Dshi_2196	0.64	-1.1
2,323,660	-		Dshi_2196	0.64	-1.6
2,323,682	+		Dshi_2196	0.66	+2.1
2,323,683	+		Dshi_2196	0.66	+2.5
2,323,705	+		Dshi_2196	0.68	-2.2
2,323,705	+		Dshi_2196	0.68	+2.0
2,323,705	+		Dshi_2196	0.68	+0.2
2,323,710	+		Dshi_2196	0.69	-0.4
2,323,713	-		Dshi_2196	0.69	-3.3
2,323,745	+		Dshi_2196	0.72	-1.1
2,323,745	+		Dshi_2196	0.72	-0.8
2,323,753	-		Dshi_2196	0.73	+1.8
2,323,763	-		Dshi_2196	0.74	-0.5
2,323,763	-		Dshi_2196	0.74	+0.5
2,323,771	+		Dshi_2196	0.75	-1.1
2,323,773	+		Dshi_2196	0.75	-0.6
2,323,781	+		Dshi_2196	0.76	-1.5
2,323,789	-		Dshi_2196	0.76	-1.8
2,323,789	-		Dshi_2196	0.76	+0.8
2,323,807	-		Dshi_2196	0.78	+1.2
2,323,815	-		Dshi_2196	0.79	-0.6
2,323,815	-		Dshi_2196	0.79	-1.2
2,323,825	+		Dshi_2196	0.80	-0.2
2,323,826	-		Dshi_2196	0.80	+1.0
2,323,875	-		Dshi_2196	0.85	-1.1
2,323,905	+		Dshi_2196	0.88	-1.4
2,323,942	-				-0.8
2,323,942	-				+1.2
2,323,942	-				-1.7
2,323,956	-				-3.1
2,323,956	-				-1.7
2,323,958	-				+2.5
2,323,958	-				-1.7
2,323,980	+				-1.1
2,323,981	+				-0.6
2,323,988	-				-1.7
2,323,993	+				+0.2
2,323,993	+				-0.1
2,324,000	+				-1.6
2,324,001	+				-0.2
2,324,001	+				-0.3
2,324,001	+				-0.8
2,324,009	-				+2.5
2,324,009	-				-0.2
2,324,009	-				-2.0
2,324,009	-				-1.5
2,324,009	-				-0.2
2,324,009	-				-1.4
2,324,009	-				-1.4
2,324,009	-				-2.0
2,324,037	-				-1.4
2,324,065	+				+0.9
2,324,066	+				-2.1
2,324,081	+				+1.1
2,324,082	-				+0.7
2,324,098	-				+0.3
2,324,098	-				-3.7
2,324,102	-				-0.5
2,324,113	-				-0.1
2,324,128	+				+0.2
2,324,128	+				-2.6
2,324,128	+				-1.6
2,324,192	+				-0.8
2,324,196	+				-0.7
2,324,197	+				-0.2
2,324,197	+				-0.4
2,324,197	+				-0.6
2,324,197	+				-0.8
2,324,205	-				-0.8
2,324,218	+				-0.2
2,324,226	-				-1.7
2,324,253	-				+1.8
2,324,253	-				-2.6
2,324,268	+				-2.4
2,324,268	+				-3.0
2,324,268	+				-1.0
2,324,268	+				-1.4
2,324,268	+				-0.8
2,324,268	+				+1.8
2,324,268	+				+2.2
2,324,268	+				-1.7
2,324,276	-				+0.2
2,324,276	-				-1.4
2,324,276	-				+0.1
2,324,276	-				-0.4
2,324,276	-				-0.0
2,324,276	-				-2.4
2,324,276	-				+0.6
2,324,276	-				-0.5
2,324,276	-				-0.6
2,324,276	-				-2.6
2,324,301	-				+0.3
2,324,336	+				-1.4
2,324,344	-				+1.2
2,324,360	-				-1.0
2,324,360	-				-0.2
2,324,392	-				-1.4
2,324,436	+				+0.2
2,324,439	+				-1.8
2,324,526	+		Dshi_2197	0.14	+3.7
2,324,534	+		Dshi_2197	0.14	+2.4
2,324,645	+		Dshi_2197	0.21	-1.4
2,324,816	-		Dshi_2197	0.31	-0.9
2,324,859	-		Dshi_2197	0.34	-2.0
2,324,869	-		Dshi_2197	0.34	+0.6
2,324,968	+		Dshi_2197	0.40	-0.4
2,325,008	+		Dshi_2197	0.43	-1.1