Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_2108

Experiment: m.b. Cobalt chloride 0.5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Cobalt chloride 0.5 mM
2,233,212	-				-2.2
2,233,224	-				-0.4
2,233,285	-				+3.3
2,233,286	+				+0.6
2,233,286	+				-1.2
2,233,294	-				-0.8
2,233,294	-				-1.0
2,233,296	+				+1.8
2,233,338	+				-2.4
2,233,343	+				-0.2
2,233,351	-				-0.9
2,233,351	-				-1.2
2,233,351	-				-1.0
2,233,358	+				-0.1
2,233,358	+				-0.1
2,233,358	+				-1.7
2,233,358	-				-1.4
2,233,365	-				+0.3
2,233,365	-				-0.3
2,233,365	-				+1.1
2,233,387	-				+0.3
2,233,389	-				-0.7
2,233,394	+				-1.3
2,233,395	+				+1.1
2,233,396	-				+0.1
2,233,396	-				-0.5
2,233,396	-				+0.0
2,233,396	-				+0.2
2,233,400	+				-0.7
2,233,400	+				-0.7
2,233,400	+				+0.6
2,233,400	+				-1.3
2,233,400	+				-0.6
2,233,400	+				+0.3
2,233,400	+				+1.1
2,233,402	-				+0.1
2,233,403	-				-0.9
2,233,403	-				-0.7
2,233,408	+				-4.1
2,233,408	-				-1.2
2,233,408	-				-0.6
2,233,408	-				-2.1
2,233,408	-				-2.1
2,233,408	-				-1.7
2,233,408	-				-1.2
2,233,408	-				-1.2
2,233,408	-				+0.1
2,233,410	+				-1.3
2,233,414	+				-0.6
2,233,415	+				+1.1
2,233,415	+				+0.3
2,233,415	+				-0.7
2,233,415	+				-2.1
2,233,415	+				-1.5
2,233,415	+				+1.8
2,233,416	-				+0.3
2,233,416	-				-1.3
2,233,421	+				-3.1
2,233,423	-				+1.9
2,233,423	-				-0.7
2,233,423	-				-0.3
2,233,423	-				+0.3
2,233,423	-				-1.6
2,233,423	-				-0.2
2,233,423	-				+0.1
2,233,423	-				+2.3
2,233,425	+				-3.9
2,233,428	+				-1.9
2,233,429	-				-0.1
2,233,431	-				+2.8
2,233,434	-				-2.9
2,233,437	+				-1.1
2,233,455	-				-0.3
2,233,455	-				+3.3
2,233,455	-				-0.7
2,233,455	-				-0.2
2,233,455	-				-0.5
2,233,460	+				+0.4
2,233,463	-				-2.3
2,233,463	-				+0.3
2,233,468	+				+0.5
2,233,470	+				-1.7
2,233,493	+				-2.1
2,233,501	+				+0.8
2,233,552	+				-2.7
2,233,552	+				-0.7
2,233,560	-				-0.8
2,233,560	-				+1.8
2,233,560	-				+2.3
2,233,560	-				-1.1
2,233,560	-				+2.6
2,233,564	+				+2.3
2,233,564	+				-1.4
2,233,564	+				+2.4
2,233,572	-				+0.3
2,233,572	-				+1.4
2,233,572	-				-0.8
2,233,572	-				+2.4
2,233,572	-				-1.0
2,233,572	-				+0.2
2,233,611	-				-1.7
2,233,611	-				+3.1
2,233,612	-				-1.0
2,233,616	+				-2.7
2,233,618	+				-1.0
2,233,618	+				+0.5
2,233,623	+				-3.9
2,233,623	+				+0.3
2,233,626	-				-0.8
2,233,626	-				+1.5
2,233,626	-				+0.2
2,233,626	-				+0.3
2,233,631	+				+0.3
2,233,631	+				-0.8
2,233,631	+				-2.9
2,233,631	+				+0.3
2,233,631	+				+0.3
2,233,631	+				-1.1
2,233,631	-				-0.7
2,233,637	+				-0.3
2,233,639	-				+0.1
2,233,646	+				-0.7
2,233,649	+				-0.9
2,233,650	+				-1.7
2,233,651	-				+2.8
2,233,658	-				-0.5
2,233,672	+				-0.4
2,233,679	+				-0.3
2,233,679	+				-0.2
2,233,680	-				-0.3
2,233,680	-				-0.4
2,233,680	-				-1.5
2,233,687	-				-1.7
2,233,716	-				-1.4
2,233,727	+				-2.1
2,233,727	+				+0.3
2,233,741	-				+1.8
2,233,741	-				-0.2
2,233,750	-				-3.5
2,233,766	+				+0.3
2,233,769	+				-1.0
2,233,769	+				+2.8
2,233,771	+				-0.7
2,233,774	+				-1.6
2,233,774	+				-1.5
2,233,774	+				-1.3
2,233,774	+				+0.3
2,233,774	+				+1.3
2,233,774	+				-1.9
2,233,774	+				+2.3
2,233,777	-				-0.9
2,233,777	-				-0.4
2,233,782	-				-0.5
2,233,829	-				+0.4
2,233,829	-				+0.9
2,233,859	+				-1.5
2,233,880	-				-1.3
2,233,886	-				+0.5
2,233,932	-				-0.4
2,233,960	-				+0.3
2,233,967	+				+0.3
2,233,968	-				+0.7
2,233,986	-				-1.1
2,234,157	+				-0.4
2,234,162	-				+0.7
2,234,172	-				-0.5
2,234,176	+				-1.4
2,234,176	+				-2.5
2,234,202	-				-1.1
2,234,208	-				-1.3
2,234,218	-				-0.6
2,234,279	+				+1.3
2,234,279	+				-1.5
2,234,297	-				-1.6
2,234,312	+				-4.1
2,234,320	-				-2.2
2,234,341	+				-1.5
2,234,367	-				-0.4
2,234,413	+				-1.9
2,234,413	+				-0.7
2,234,421	-				-3.3
2,234,445	-				-3.5
2,234,474	-		Dshi_2108	0.10	-1.7
2,234,499	-		Dshi_2108	0.11	+1.3
2,234,504	+		Dshi_2108	0.12	-1.0
2,234,514	+		Dshi_2108	0.12	+0.3
2,234,638	+		Dshi_2108	0.17	+0.3
2,234,658	-		Dshi_2108	0.18	+0.3
2,234,668	-		Dshi_2108	0.18	-2.7
2,234,686	-		Dshi_2108	0.19	-3.2
2,234,688	+		Dshi_2108	0.19	+0.3
2,234,691	-		Dshi_2108	0.19	-0.2
2,234,724	-		Dshi_2108	0.20	-0.8
2,234,762	-		Dshi_2108	0.22	+0.3
2,234,798	-		Dshi_2108	0.23	-0.6
2,234,807	-		Dshi_2108	0.24	-1.3
2,234,874	-		Dshi_2108	0.26	-1.7
2,234,936	-		Dshi_2108	0.29	-0.4
2,234,943	-		Dshi_2108	0.29	-2.5
2,234,983	-		Dshi_2108	0.31	+3.7
2,234,993	-		Dshi_2108	0.31	-2.5
2,235,018	+		Dshi_2108	0.32	-1.7
2,235,196	+		Dshi_2108	0.39	-0.0
2,235,243	+		Dshi_2108	0.41	+1.8
2,235,245	-		Dshi_2108	0.41	+2.3
2,235,245	-		Dshi_2108	0.41	+0.8
2,235,259	+		Dshi_2108	0.42	-1.1
2,235,308	-		Dshi_2108	0.44	+0.8
2,235,319	+		Dshi_2108	0.44	-1.1
2,235,342	+		Dshi_2108	0.45	-1.5
2,235,342	+		Dshi_2108	0.45	+0.3
2,235,384	-		Dshi_2108	0.47	+0.4
2,235,391	-		Dshi_2108	0.47	-2.1
2,235,507	+		Dshi_2108	0.52	-4.3
2,235,516	+		Dshi_2108	0.52	-0.0
2,235,517	-		Dshi_2108	0.52	-3.1
2,235,599	-		Dshi_2108	0.55	-0.7
2,235,600	-		Dshi_2108	0.55	+2.8
2,235,619	-		Dshi_2108	0.56	-2.1
2,235,737	+		Dshi_2108	0.61	-0.6
2,235,807	-		Dshi_2108	0.64	+0.6
2,235,828	+		Dshi_2108	0.64	+0.7
2,235,858	-		Dshi_2108	0.66	-1.1
2,235,875	-		Dshi_2108	0.66	-2.2
2,235,880	-		Dshi_2108	0.67	-2.3
2,235,945	+				+0.3
2,235,945	+		Dshi_2108	0.69	-0.9
2,235,953	-		Dshi_2108	0.69	-4.3
2,235,966	+		Dshi_2108	0.70	+0.3
2,235,991	+		Dshi_2108	0.71	+0.7
2,236,005	-		Dshi_2108	0.71	-0.4
2,236,029	-		Dshi_2108	0.72	-1.7
2,236,128	+		Dshi_2108	0.76	-1.3
2,236,138	+		Dshi_2108	0.77	-1.3
2,236,166	+		Dshi_2108	0.78	+0.4
2,236,302	+		Dshi_2108	0.83	-1.7
2,236,346	+		Dshi_2108	0.85	-1.7
2,236,346	+		Dshi_2108	0.85	-0.7
2,236,375	-		Dshi_2108	0.86	-2.0
2,236,380	-		Dshi_2108	0.86	-1.1
2,236,468	-		Dshi_2108	0.90	+0.3
2,236,514	-				-1.6
2,236,725	+				-0.9
2,236,780	-				-3.6
2,236,829	+				-2.4
2,236,837	-				-1.2
2,236,837	-				+0.3
2,236,872	-				-2.0
2,236,876	+				+0.3
2,236,953	+				-1.5
2,237,117	+		Dshi_2109	0.20	+0.3
2,237,139	+		Dshi_2109	0.21	+0.3
2,237,147	-		Dshi_2109	0.22	-2.7
2,237,147	-		Dshi_2109	0.22	-2.7
2,237,152	-		Dshi_2109	0.23	-2.1
2,237,328	-		Dshi_2109	0.38	-3.0
2,237,368	-		Dshi_2109	0.41	+0.3
2,237,394	-		Dshi_2109	0.44	-0.3
2,237,399	-		Dshi_2109	0.44	-0.2
2,237,416	-		Dshi_2109	0.45	-1.9
2,237,477	+		Dshi_2109	0.51	-0.7
2,237,522	+		Dshi_2109	0.55	-0.9
2,237,579	-		Dshi_2109	0.60	-0.5
2,237,581	+		Dshi_2109	0.60	-1.0
2,237,682	+		Dshi_2109	0.69	-1.4