Experiment: m.b. Cobalt chloride 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_1779 and Dshi_1780 overlap by 1 nucleotides Dshi_1780 and Dshi_1781 are separated by 57 nucleotides Dshi_1781 and Dshi_1782 are separated by 104 nucleotides
Dshi_1779: Dshi_1779 - acetolactate synthase, large subunit, biosynthetic type (RefSeq), at 1,848,348 to 1,850,105
_1779
Dshi_1780: Dshi_1780 - hypothetical protein (RefSeq), at 1,850,105 to 1,850,416
_1780
Dshi_1781: Dshi_1781 - acetolactate synthase, small subunit (RefSeq), at 1,850,474 to 1,851,046
_1781
Dshi_1782: Dshi_1782 - Rieske (2Fe-2S) domain protein (RefSeq), at 1,851,151 to 1,852,302
_1782
Position (kb)
1850
1851
1852 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 1850.151 kb on + strand, within Dshi_1780 at 1850.270 kb on + strand, within Dshi_1780 at 1850.272 kb on - strand, within Dshi_1780 at 1850.410 kb on - strand at 1850.449 kb on + strand at 1850.555 kb on + strand, within Dshi_1781 at 1850.569 kb on - strand, within Dshi_1781 at 1850.722 kb on - strand, within Dshi_1781 at 1850.771 kb on + strand, within Dshi_1781 at 1850.779 kb on - strand, within Dshi_1781 at 1850.794 kb on + strand, within Dshi_1781 at 1850.861 kb on - strand, within Dshi_1781 at 1851.253 kb on - strand at 1851.376 kb on + strand, within Dshi_1782 at 1851.384 kb on - strand, within Dshi_1782 at 1851.384 kb on - strand, within Dshi_1782 at 1851.384 kb on - strand, within Dshi_1782 at 1851.459 kb on + strand, within Dshi_1782 at 1851.512 kb on + strand, within Dshi_1782 at 1851.520 kb on - strand, within Dshi_1782 at 1851.520 kb on - strand, within Dshi_1782 at 1851.549 kb on - strand, within Dshi_1782 at 1851.574 kb on - strand, within Dshi_1782 at 1851.622 kb on - strand, within Dshi_1782 at 1851.642 kb on - strand, within Dshi_1782 at 1851.683 kb on + strand, within Dshi_1782 at 1851.713 kb on - strand, within Dshi_1782 at 1851.728 kb on + strand, within Dshi_1782 at 1851.794 kb on + strand, within Dshi_1782 at 1851.875 kb on + strand, within Dshi_1782 at 1852.017 kb on + strand, within Dshi_1782
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.5 mM remove 1,850,151 + Dshi_1780 0.15 +0.2 1,850,270 + Dshi_1780 0.53 -1.4 1,850,272 - Dshi_1780 0.54 -0.5 1,850,410 - +0.2 1,850,449 + +0.5 1,850,555 + Dshi_1781 0.14 -0.4 1,850,569 - Dshi_1781 0.17 +0.8 1,850,722 - Dshi_1781 0.43 -0.1 1,850,771 + Dshi_1781 0.52 +2.8 1,850,779 - Dshi_1781 0.53 +1.0 1,850,794 + Dshi_1781 0.56 +1.2 1,850,861 - Dshi_1781 0.68 +2.2 1,851,253 - +2.8 1,851,376 + Dshi_1782 0.20 -1.8 1,851,384 - Dshi_1782 0.20 -3.3 1,851,384 - Dshi_1782 0.20 -1.5 1,851,384 - Dshi_1782 0.20 -2.6 1,851,459 + Dshi_1782 0.27 -0.7 1,851,512 + Dshi_1782 0.31 +0.2 1,851,520 - Dshi_1782 0.32 -0.3 1,851,520 - Dshi_1782 0.32 -0.8 1,851,549 - Dshi_1782 0.35 -0.6 1,851,574 - Dshi_1782 0.37 -3.0 1,851,622 - Dshi_1782 0.41 -2.4 1,851,642 - Dshi_1782 0.43 -0.8 1,851,683 + Dshi_1782 0.46 +2.0 1,851,713 - Dshi_1782 0.49 -2.4 1,851,728 + Dshi_1782 0.50 -1.4 1,851,794 + Dshi_1782 0.56 +0.2 1,851,875 + Dshi_1782 0.63 -0.8 1,852,017 + Dshi_1782 0.75 -1.6
Or see this region's nucleotide sequence