Experiment: m.b. Cobalt chloride 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_1483 and Dshi_1484 are separated by 163 nucleotides Dshi_1484 and Dshi_1485 are separated by 187 nucleotides Dshi_1485 and Dshi_1486 are separated by 181 nucleotides
Dshi_1483: Dshi_1483 - hypothetical protein (RefSeq), at 1,538,375 to 1,538,743
_1483
Dshi_1484: Dshi_1484 - hypothetical protein (RefSeq), at 1,538,907 to 1,539,512
_1484
Dshi_1485: Dshi_1485 - FAD dependent oxidoreductase (RefSeq), at 1,539,700 to 1,542,114
_1485
Dshi_1486: Dshi_1486 - BCCT transporter (RefSeq), at 1,542,296 to 1,544,161
_1486
Position (kb)
1539
1540
1541
1542
1543 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 1539.008 kb on - strand, within Dshi_1484 at 1539.146 kb on + strand, within Dshi_1484 at 1539.254 kb on + strand, within Dshi_1484 at 1539.426 kb on + strand, within Dshi_1484 at 1539.487 kb on + strand at 1539.491 kb on + strand at 1539.612 kb on - strand at 1539.758 kb on - strand at 1539.802 kb on - strand at 1539.826 kb on + strand at 1539.924 kb on - strand at 1540.084 kb on - strand, within Dshi_1485 at 1540.184 kb on - strand, within Dshi_1485 at 1540.255 kb on + strand, within Dshi_1485 at 1540.540 kb on + strand, within Dshi_1485 at 1540.613 kb on + strand, within Dshi_1485 at 1540.709 kb on - strand, within Dshi_1485 at 1540.732 kb on - strand, within Dshi_1485 at 1540.804 kb on + strand, within Dshi_1485 at 1540.933 kb on + strand, within Dshi_1485 at 1541.558 kb on + strand, within Dshi_1485 at 1541.658 kb on + strand, within Dshi_1485 at 1541.671 kb on + strand, within Dshi_1485 at 1541.717 kb on + strand, within Dshi_1485 at 1541.738 kb on + strand, within Dshi_1485 at 1541.804 kb on + strand, within Dshi_1485 at 1541.804 kb on + strand, within Dshi_1485 at 1541.868 kb on - strand, within Dshi_1485 at 1542.067 kb on + strand at 1542.067 kb on + strand at 1542.096 kb on + strand at 1542.281 kb on + strand at 1542.281 kb on - strand at 1542.344 kb on + strand at 1542.390 kb on + strand at 1542.509 kb on + strand, within Dshi_1486 at 1542.855 kb on - strand, within Dshi_1486
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.5 mM remove 1,539,008 - Dshi_1484 0.17 +1.8 1,539,146 + Dshi_1484 0.39 -1.8 1,539,254 + Dshi_1484 0.57 +0.2 1,539,426 + Dshi_1484 0.86 -0.8 1,539,487 + -1.4 1,539,491 + +1.2 1,539,612 - +3.0 1,539,758 - +0.2 1,539,802 - +0.2 1,539,826 + -1.8 1,539,924 - -1.8 1,540,084 - Dshi_1485 0.16 -2.6 1,540,184 - Dshi_1485 0.20 +0.6 1,540,255 + Dshi_1485 0.23 -2.1 1,540,540 + Dshi_1485 0.35 +0.1 1,540,613 + Dshi_1485 0.38 -1.0 1,540,709 - Dshi_1485 0.42 -2.7 1,540,732 - Dshi_1485 0.43 -1.4 1,540,804 + Dshi_1485 0.46 +0.2 1,540,933 + Dshi_1485 0.51 +0.0 1,541,558 + Dshi_1485 0.77 -0.8 1,541,658 + Dshi_1485 0.81 +0.6 1,541,671 + Dshi_1485 0.82 -1.8 1,541,717 + Dshi_1485 0.84 -2.0 1,541,738 + Dshi_1485 0.84 -1.8 1,541,804 + Dshi_1485 0.87 -0.8 1,541,804 + Dshi_1485 0.87 -0.7 1,541,868 - Dshi_1485 0.90 +0.1 1,542,067 + -1.8 1,542,067 + -1.0 1,542,096 + +1.2 1,542,281 + -1.4 1,542,281 - -2.1 1,542,344 + -0.5 1,542,390 + +1.2 1,542,509 + Dshi_1486 0.11 -1.7 1,542,855 - Dshi_1486 0.30 +0.0
Or see this region's nucleotide sequence