Experiment: m.b. Cobalt chloride 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_1012 and Dshi_1013 are separated by 87 nucleotides Dshi_1013 and Dshi_1014 are separated by 2 nucleotides Dshi_1014 and Dshi_1015 are separated by 41 nucleotides
Dshi_1012: Dshi_1012 - Methionine adenosyltransferase (RefSeq), at 1,045,725 to 1,046,909
_1012
Dshi_1013: Dshi_1013 - apolipoprotein N-acyltransferase (RefSeq), at 1,046,997 to 1,048,490
_1013
Dshi_1014: Dshi_1014 - CBS domain containing protein (RefSeq), at 1,048,493 to 1,049,401
_1014
Dshi_1015: Dshi_1015 - protein of unknown function UPF0054 (RefSeq), at 1,049,443 to 1,049,988
_1015
Position (kb)
1046
1047
1048
1049 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1047.010 kb on + strand at 1047.010 kb on + strand at 1047.013 kb on - strand at 1047.089 kb on - strand at 1047.089 kb on - strand at 1047.147 kb on - strand, within Dshi_1013 at 1047.203 kb on - strand, within Dshi_1013 at 1047.330 kb on - strand, within Dshi_1013 at 1047.332 kb on + strand, within Dshi_1013 at 1047.362 kb on + strand, within Dshi_1013 at 1047.422 kb on - strand, within Dshi_1013 at 1047.471 kb on + strand, within Dshi_1013 at 1047.523 kb on + strand, within Dshi_1013 at 1047.663 kb on + strand, within Dshi_1013 at 1047.983 kb on + strand, within Dshi_1013 at 1047.983 kb on + strand, within Dshi_1013 at 1047.991 kb on - strand, within Dshi_1013 at 1047.991 kb on - strand, within Dshi_1013 at 1048.008 kb on - strand, within Dshi_1013 at 1048.014 kb on + strand, within Dshi_1013 at 1048.022 kb on - strand, within Dshi_1013 at 1048.058 kb on - strand, within Dshi_1013 at 1048.091 kb on + strand, within Dshi_1013 at 1048.116 kb on + strand, within Dshi_1013 at 1048.177 kb on + strand, within Dshi_1013 at 1048.185 kb on - strand, within Dshi_1013 at 1048.278 kb on - strand, within Dshi_1013 at 1048.288 kb on - strand, within Dshi_1013 at 1048.829 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.5 mM remove 1,047,010 + -0.5 1,047,010 + -2.2 1,047,013 - -3.0 1,047,089 - -0.6 1,047,089 - +0.4 1,047,147 - Dshi_1013 0.10 +0.4 1,047,203 - Dshi_1013 0.14 +0.8 1,047,330 - Dshi_1013 0.22 -0.2 1,047,332 + Dshi_1013 0.22 +0.4 1,047,362 + Dshi_1013 0.24 +0.4 1,047,422 - Dshi_1013 0.28 -2.9 1,047,471 + Dshi_1013 0.32 -3.2 1,047,523 + Dshi_1013 0.35 +2.7 1,047,663 + Dshi_1013 0.45 -0.6 1,047,983 + Dshi_1013 0.66 -0.0 1,047,983 + Dshi_1013 0.66 -0.1 1,047,991 - Dshi_1013 0.67 +2.7 1,047,991 - Dshi_1013 0.67 +0.4 1,048,008 - Dshi_1013 0.68 -0.6 1,048,014 + Dshi_1013 0.68 +1.9 1,048,022 - Dshi_1013 0.69 +0.4 1,048,058 - Dshi_1013 0.71 -0.6 1,048,091 + Dshi_1013 0.73 +1.9 1,048,116 + Dshi_1013 0.75 -0.6 1,048,177 + Dshi_1013 0.79 +0.4 1,048,185 - Dshi_1013 0.80 -1.4 1,048,278 - Dshi_1013 0.86 +1.4 1,048,288 - Dshi_1013 0.86 +1.9 1,048,829 - +0.4
Or see this region's nucleotide sequence