Experiment: m.b. Cobalt chloride 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_0850 and Dshi_0851 are separated by 196 nucleotides Dshi_0851 and Dshi_R0020 are separated by 192 nucleotides Dshi_R0020 and Dshi_0852 are separated by 71 nucleotides
Dshi_0850: Dshi_0850 - DEAD/DEAH box helicase domain protein (RefSeq), at 859,653 to 861,845
_0850
Dshi_0851: Dshi_0851 - protein of unknown function DUF159 (RefSeq), at 862,042 to 862,707
_0851
Dshi_R0020: Dshi_R0020 - tRNA-Gly (RefSeq), at 862,900 to 862,973
_R0020
Dshi_0852: Dshi_0852 - lipid A ABC exporter family, fused ATPase and inner membrane subunits (RefSeq), at 863,045 to 864,853
_0852
Position (kb) 862
863 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 861.043 kb on + strand, within Dshi_0850 at 861.091 kb on + strand, within Dshi_0850 at 861.123 kb on - strand, within Dshi_0850 at 861.125 kb on + strand, within Dshi_0850 at 861.133 kb on - strand, within Dshi_0850 at 861.133 kb on - strand, within Dshi_0850 at 861.258 kb on + strand, within Dshi_0850 at 861.263 kb on + strand, within Dshi_0850 at 861.302 kb on + strand, within Dshi_0850 at 861.303 kb on + strand, within Dshi_0850 at 861.385 kb on + strand, within Dshi_0850 at 861.523 kb on - strand, within Dshi_0850 at 861.963 kb on + strand at 862.036 kb on + strand at 862.140 kb on + strand, within Dshi_0851 at 862.140 kb on - strand, within Dshi_0851 at 862.201 kb on - strand, within Dshi_0851 at 862.215 kb on - strand, within Dshi_0851 at 862.255 kb on + strand, within Dshi_0851 at 862.359 kb on + strand, within Dshi_0851 at 862.367 kb on - strand, within Dshi_0851 at 862.394 kb on + strand, within Dshi_0851 at 862.409 kb on - strand, within Dshi_0851 at 862.425 kb on - strand, within Dshi_0851 at 862.615 kb on + strand, within Dshi_0851 at 863.139 kb on + strand at 863.252 kb on - strand, within Dshi_0852 at 863.268 kb on + strand, within Dshi_0852 at 863.699 kb on + strand, within Dshi_0852
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.5 mM remove 861,043 + Dshi_0850 0.63 -2.2 861,091 + Dshi_0850 0.66 -0.2 861,123 - Dshi_0850 0.67 +2.0 861,125 + Dshi_0850 0.67 +0.0 861,133 - Dshi_0850 0.67 -0.7 861,133 - Dshi_0850 0.67 -0.6 861,258 + Dshi_0850 0.73 +2.4 861,263 + Dshi_0850 0.73 -1.9 861,302 + Dshi_0850 0.75 +0.4 861,303 + Dshi_0850 0.75 -0.6 861,385 + Dshi_0850 0.79 +1.0 861,523 - Dshi_0850 0.85 -2.4 861,963 + -0.5 862,036 + -1.3 862,140 + Dshi_0851 0.15 -0.1 862,140 - Dshi_0851 0.15 +1.0 862,201 - Dshi_0851 0.24 +0.8 862,215 - Dshi_0851 0.26 +0.4 862,255 + Dshi_0851 0.32 +1.4 862,359 + Dshi_0851 0.48 +0.4 862,367 - Dshi_0851 0.49 -3.5 862,394 + Dshi_0851 0.53 +0.4 862,409 - Dshi_0851 0.55 -1.2 862,425 - Dshi_0851 0.58 -0.6 862,615 + Dshi_0851 0.86 +2.0 863,139 + -3.1 863,252 - Dshi_0852 0.11 -0.6 863,268 + Dshi_0852 0.12 -0.5 863,699 + Dshi_0852 0.36 +2.7
Or see this region's nucleotide sequence