Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_0705

Experiment: m.b. Cobalt chloride 0.5 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDshi_0704 and Dshi_0705 overlap by 4 nucleotides Dshi_0704: Dshi_0704 - DegT/DnrJ/EryC1/StrS aminotransferase (RefSeq), at 710,642 to 711,829 _0704 Dshi_0705: Dshi_0705 - hypothetical protein (RefSeq), at 711,826 to 713,256 _0705 Position (kb) 711 712 713 714Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2at 710.914 kb on + strand, within Dshi_0704at 710.923 kb on - strand, within Dshi_0704at 710.923 kb on - strand, within Dshi_0704at 710.966 kb on - strand, within Dshi_0704at 711.091 kb on - strand, within Dshi_0704at 711.107 kb on + strand, within Dshi_0704at 711.153 kb on + strand, within Dshi_0704at 711.164 kb on + strand, within Dshi_0704at 711.169 kb on + strand, within Dshi_0704at 711.257 kb on + strand, within Dshi_0704at 711.279 kb on + strandat 711.289 kb on + strand, within Dshi_0704at 711.294 kb on - strand, within Dshi_0704at 711.392 kb on + strand, within Dshi_0704at 711.423 kb on + strand, within Dshi_0704at 711.487 kb on - strand, within Dshi_0704at 711.523 kb on + strand, within Dshi_0704at 711.547 kb on + strand, within Dshi_0704at 711.557 kb on - strand, within Dshi_0704at 711.740 kb on + strandat 711.740 kb on + strandat 711.740 kb on + strandat 711.757 kb on + strandat 711.819 kb on - strandat 711.919 kb on - strandat 711.975 kb on + strand, within Dshi_0705at 712.018 kb on + strand, within Dshi_0705at 712.202 kb on - strand, within Dshi_0705at 712.210 kb on + strand, within Dshi_0705at 712.213 kb on - strand, within Dshi_0705at 712.617 kb on + strand, within Dshi_0705at 712.632 kb on + strand, within Dshi_0705at 712.705 kb on - strand, within Dshi_0705at 712.851 kb on + strand, within Dshi_0705at 712.879 kb on - strand, within Dshi_0705at 712.897 kb on + strand, within Dshi_0705at 712.909 kb on + strand, within Dshi_0705at 712.951 kb on + strand, within Dshi_0705at 713.084 kb on + strand, within Dshi_0705at 713.130 kb on + strandat 713.131 kb on - strandat 713.417 kb on + strandat 713.449 kb on - strandat 713.465 kb on + strandat 713.534 kb on - strandat 713.606 kb on + strandat 713.683 kb on + strandat 713.869 kb on + strandat 713.950 kb on - strandat 714.068 kb on + strandat 714.076 kb on - strandat 714.157 kb on - strandat 714.220 kb on + strandat 714.236 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.5 mM
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710,914 + Dshi_0704 0.23 +0.4
710,923 - Dshi_0704 0.24 +0.4
710,923 - Dshi_0704 0.24 -2.6
710,966 - Dshi_0704 0.27 +0.4
711,091 - Dshi_0704 0.38 +2.0
711,107 + Dshi_0704 0.39 +1.4
711,153 + Dshi_0704 0.43 -0.2
711,164 + Dshi_0704 0.44 -0.6
711,169 + Dshi_0704 0.44 -1.2
711,257 + Dshi_0704 0.52 -0.8
711,279 + -0.6
711,289 + Dshi_0704 0.54 -1.2
711,294 - Dshi_0704 0.55 -1.3
711,392 + Dshi_0704 0.63 -0.9
711,423 + Dshi_0704 0.66 -0.0
711,487 - Dshi_0704 0.71 -2.3
711,523 + Dshi_0704 0.74 -1.3
711,547 + Dshi_0704 0.76 -1.6
711,557 - Dshi_0704 0.77 -0.9
711,740 + -0.6
711,740 + -0.5
711,740 + -0.6
711,757 + +0.7
711,819 - -1.2
711,919 - +2.0
711,975 + Dshi_0705 0.10 -2.3
712,018 + Dshi_0705 0.13 -0.6
712,202 - Dshi_0705 0.26 +1.7
712,210 + Dshi_0705 0.27 -1.9
712,213 - Dshi_0705 0.27 -0.7
712,617 + Dshi_0705 0.55 -0.9
712,632 + Dshi_0705 0.56 -0.4
712,705 - Dshi_0705 0.61 -2.2
712,851 + Dshi_0705 0.72 -2.1
712,879 - Dshi_0705 0.74 -1.2
712,897 + Dshi_0705 0.75 +0.4
712,909 + Dshi_0705 0.76 -2.1
712,951 + Dshi_0705 0.79 -3.2
713,084 + Dshi_0705 0.88 -1.8
713,130 + -4.0
713,131 - +0.1
713,417 + +0.4
713,449 - -1.4
713,465 + -1.2
713,534 - -0.8
713,606 + +0.0
713,683 + -0.4
713,869 + +1.7
713,950 - +1.9
714,068 + -0.0
714,076 - -0.0
714,157 - -1.9
714,220 + -0.9
714,236 - -1.0

Or see this region's nucleotide sequence