Experiment: m.b. Cobalt chloride 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_0670 and Dshi_0671 are separated by 490 nucleotides Dshi_0671 and Dshi_0672 are separated by 30 nucleotides Dshi_0672 and Dshi_0673 overlap by 20 nucleotides
Dshi_0670: Dshi_0670 - Haloacid dehalogenase domain protein hydrolase (RefSeq), at 675,215 to 675,919
_0670
Dshi_0671: Dshi_0671 - methyltransferase small (RefSeq), at 676,410 to 677,411
_0671
Dshi_0672: Dshi_0672 - short-chain dehydrogenase/reductase SDR (RefSeq), at 677,442 to 678,248
_0672
Dshi_0673: Dshi_0673 - hypothetical protein (RefSeq), at 678,229 to 678,606
_0673
Position (kb)
676
677
678 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 675.415 kb on + strand, within Dshi_0670 at 675.438 kb on - strand, within Dshi_0670 at 675.443 kb on + strand, within Dshi_0670 at 675.635 kb on + strand, within Dshi_0670 at 675.643 kb on - strand, within Dshi_0670 at 675.655 kb on + strand, within Dshi_0670 at 675.843 kb on - strand, within Dshi_0670 at 675.899 kb on - strand at 675.935 kb on + strand at 675.950 kb on - strand at 676.079 kb on + strand at 676.082 kb on - strand at 676.104 kb on + strand at 676.118 kb on + strand at 676.126 kb on - strand at 676.161 kb on - strand at 676.232 kb on + strand at 676.263 kb on - strand at 676.286 kb on - strand at 676.318 kb on + strand at 676.406 kb on + strand at 676.406 kb on + strand at 676.457 kb on - strand at 676.468 kb on + strand at 676.484 kb on + strand at 676.645 kb on - strand, within Dshi_0671 at 676.832 kb on + strand, within Dshi_0671 at 676.869 kb on + strand, within Dshi_0671 at 677.020 kb on + strand, within Dshi_0671 at 677.176 kb on - strand, within Dshi_0671 at 677.262 kb on - strand, within Dshi_0671 at 677.272 kb on - strand, within Dshi_0671 at 677.298 kb on + strand, within Dshi_0671 at 677.313 kb on - strand at 677.333 kb on + strand at 677.341 kb on - strand at 677.425 kb on - strand at 678.391 kb on - strand, within Dshi_0673
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.5 mM remove 675,415 + Dshi_0670 0.28 -0.3 675,438 - Dshi_0670 0.32 -1.0 675,443 + Dshi_0670 0.32 -2.8 675,635 + Dshi_0670 0.60 -1.3 675,643 - Dshi_0670 0.61 -1.3 675,655 + Dshi_0670 0.62 -0.1 675,843 - Dshi_0670 0.89 +2.9 675,899 - -0.5 675,935 + -0.3 675,950 - -2.4 676,079 + -3.5 676,082 - +0.3 676,104 + -0.7 676,118 + +2.3 676,126 - -1.7 676,161 - -0.9 676,232 + +0.7 676,263 - +0.3 676,286 - +0.9 676,318 + +0.3 676,406 + +0.3 676,406 + +0.9 676,457 - -2.4 676,468 + +0.3 676,484 + -0.7 676,645 - Dshi_0671 0.23 -3.4 676,832 + Dshi_0671 0.42 -1.7 676,869 + Dshi_0671 0.46 -0.7 677,020 + Dshi_0671 0.61 -2.3 677,176 - Dshi_0671 0.76 -0.7 677,262 - Dshi_0671 0.85 -1.5 677,272 - Dshi_0671 0.86 -3.0 677,298 + Dshi_0671 0.89 -2.0 677,313 - -1.3 677,333 + -1.0 677,341 - +0.3 677,425 - -0.1 678,391 - Dshi_0673 0.43 -0.3
Or see this region's nucleotide sequence