Experiment: m.b. Cobalt chloride 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_0361 and Dshi_0362 overlap by 4 nucleotides Dshi_0362 and Dshi_0363 are separated by 39 nucleotides
Dshi_0361: Dshi_0361 - peptidase M16 domain protein (RefSeq), at 343,363 to 344,724
_0361
Dshi_0362: Dshi_0362 - peptidase M16 domain protein (RefSeq), at 344,721 to 346,034
_0362
Dshi_0363: Dshi_0363 - DNA mismatch repair protein MutL (RefSeq), at 346,074 to 347,939
_0363
Position (kb) 344
345
346
347 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 343.929 kb on + strand, within Dshi_0361 at 344.081 kb on + strand, within Dshi_0361 at 344.081 kb on + strand, within Dshi_0361 at 344.089 kb on - strand, within Dshi_0361 at 344.089 kb on - strand, within Dshi_0361 at 344.099 kb on - strand, within Dshi_0361 at 344.169 kb on + strand, within Dshi_0361 at 344.169 kb on + strand, within Dshi_0361 at 344.228 kb on - strand, within Dshi_0361 at 344.273 kb on - strand, within Dshi_0361 at 344.320 kb on + strand, within Dshi_0361 at 344.320 kb on + strand, within Dshi_0361 at 344.328 kb on - strand, within Dshi_0361 at 344.366 kb on - strand, within Dshi_0361 at 344.519 kb on - strand, within Dshi_0361 at 344.526 kb on - strand, within Dshi_0361 at 344.565 kb on + strand, within Dshi_0361 at 344.575 kb on - strand, within Dshi_0361 at 344.575 kb on - strand, within Dshi_0361 at 344.575 kb on - strand, within Dshi_0361 at 344.582 kb on + strand, within Dshi_0361 at 344.595 kb on + strand at 344.595 kb on + strand at 344.600 kb on + strand at 344.733 kb on - strand at 344.779 kb on - strand at 344.837 kb on + strand at 344.872 kb on + strand, within Dshi_0362 at 345.236 kb on + strand, within Dshi_0362 at 345.382 kb on - strand, within Dshi_0362 at 345.440 kb on + strand, within Dshi_0362 at 345.463 kb on + strand, within Dshi_0362 at 345.634 kb on + strand, within Dshi_0362 at 345.783 kb on - strand, within Dshi_0362 at 345.942 kb on - strand at 345.968 kb on + strand at 346.214 kb on - strand at 346.385 kb on - strand, within Dshi_0363 at 346.507 kb on - strand, within Dshi_0363 at 346.845 kb on - strand, within Dshi_0363 at 346.868 kb on - strand, within Dshi_0363 at 346.919 kb on + strand, within Dshi_0363 at 346.937 kb on + strand, within Dshi_0363 at 347.029 kb on + strand, within Dshi_0363
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.5 mM remove 343,929 + Dshi_0361 0.42 -1.5 344,081 + Dshi_0361 0.53 -1.3 344,081 + Dshi_0361 0.53 -1.3 344,089 - Dshi_0361 0.53 +0.3 344,089 - Dshi_0361 0.53 -0.7 344,099 - Dshi_0361 0.54 +0.3 344,169 + Dshi_0361 0.59 +0.5 344,169 + Dshi_0361 0.59 -1.3 344,228 - Dshi_0361 0.64 -1.1 344,273 - Dshi_0361 0.67 -2.5 344,320 + Dshi_0361 0.70 +2.9 344,320 + Dshi_0361 0.70 -0.8 344,328 - Dshi_0361 0.71 -2.8 344,366 - Dshi_0361 0.74 +2.9 344,519 - Dshi_0361 0.85 -2.4 344,526 - Dshi_0361 0.85 +0.3 344,565 + Dshi_0361 0.88 +1.2 344,575 - Dshi_0361 0.89 +1.3 344,575 - Dshi_0361 0.89 +0.9 344,575 - Dshi_0361 0.89 +0.6 344,582 + Dshi_0361 0.90 -0.8 344,595 + +0.1 344,595 + -0.6 344,600 + -1.0 344,733 - +1.9 344,779 - -0.2 344,837 + -0.7 344,872 + Dshi_0362 0.11 -3.0 345,236 + Dshi_0362 0.39 -1.1 345,382 - Dshi_0362 0.50 -1.0 345,440 + Dshi_0362 0.55 -0.7 345,463 + Dshi_0362 0.56 +0.1 345,634 + Dshi_0362 0.69 -0.7 345,783 - Dshi_0362 0.81 -0.7 345,942 - -1.6 345,968 + -0.6 346,214 - +1.3 346,385 - Dshi_0363 0.17 -2.6 346,507 - Dshi_0363 0.23 -0.8 346,845 - Dshi_0363 0.41 -0.7 346,868 - Dshi_0363 0.43 -1.5 346,919 + Dshi_0363 0.45 -0.5 346,937 + Dshi_0363 0.46 +0.3 347,029 + Dshi_0363 0.51 +0.3
Or see this region's nucleotide sequence