Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_0327

Experiment: m.b. Cobalt chloride 0.5 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDshi_0325 and Dshi_0326 are separated by 62 nucleotidesDshi_0326 and Dshi_0327 overlap by 4 nucleotidesDshi_0327 and Dshi_0328 overlap by 4 nucleotides Dshi_0325: Dshi_0325 - short-chain dehydrogenase/reductase SDR (RefSeq), at 312,924 to 313,655 _0325 Dshi_0326: Dshi_0326 - GTP-binding protein HSR1-related (RefSeq), at 313,718 to 314,371 _0326 Dshi_0327: Dshi_0327 - MOSC domain containing protein (RefSeq), at 314,368 to 315,117 _0327 Dshi_0328: Dshi_0328 - 60 kDa inner membrane insertion protein (RefSeq), at 315,114 to 316,934 _0328 Position (kb) 314 315 316Strain fitness (log2 ratio) -1 0 1 2at 313.370 kb on - strand, within Dshi_0325at 313.383 kb on + strand, within Dshi_0325

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.5 mM
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313,370 - Dshi_0325 0.61 +0.9
313,383 + Dshi_0325 0.63 +2.7

Or see this region's nucleotide sequence