Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_1855
Experiment: MoYLS4 with Spectinomycin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Spectinomycin 0.025 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,268,667 | - | DvMF_1854 | 0.26 | -0.2 | |
2,268,837 | + | DvMF_1854 | 0.44 | -0.0 | |
2,268,937 | + | DvMF_1854 | 0.55 | -0.4 | |
2,269,043 | - | DvMF_1854 | 0.66 | -0.5 | |
2,269,068 | + | DvMF_1854 | 0.69 | -0.2 | |
2,269,143 | - | DvMF_1854 | 0.77 | -0.3 | |
2,269,143 | - | DvMF_1854 | 0.77 | -0.4 | |
2,269,451 | + | DvMF_1855 | 0.11 | +0.3 | |
2,269,478 | - | DvMF_1855 | 0.15 | -0.0 | |
2,269,675 | - | DvMF_1855 | 0.40 | -0.1 | |
2,269,675 | - | DvMF_1855 | 0.40 | +0.2 | |
2,269,682 | - | DvMF_1855 | 0.41 | -0.2 | |
2,269,754 | + | DvMF_1855 | 0.50 | +0.2 | |
2,269,859 | - | DvMF_1855 | 0.64 | -0.3 | |
2,269,879 | + | DvMF_1855 | 0.67 | -0.4 | |
2,269,887 | - | DvMF_1855 | 0.68 | +0.1 | |
2,270,019 | - | DvMF_1855 | 0.85 | -0.1 | |
2,270,065 | - | +0.0 | |||
2,270,065 | - | -0.3 | |||
2,270,065 | - | -0.0 | |||
2,270,065 | - | +0.1 | |||
2,270,192 | + | -0.5 | |||
2,270,712 | + | +0.3 | |||
2,270,712 | + | -0.0 | |||
2,270,836 | + | +0.2 | |||
2,270,861 | - | -0.5 | |||
2,270,904 | + | -1.0 | |||
2,270,939 | - | -1.1 |
Or see this region's nucleotide sequence