Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_1825
Experiment: MoYLS4 with Spectinomycin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Spectinomycin 0.025 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,226,570 | + | DvMF_1824 | 0.37 | +0.7 | |
2,226,644 | - | DvMF_1824 | 0.43 | +0.2 | |
2,226,668 | - | DvMF_1824 | 0.45 | -0.3 | |
2,227,009 | + | DvMF_1824 | 0.71 | -0.1 | |
2,227,340 | - | -0.1 | |||
2,227,462 | + | +0.0 | |||
2,227,525 | + | +0.4 | |||
2,227,804 | - | DvMF_1825 | 0.33 | +0.2 | |
2,227,931 | - | DvMF_1825 | 0.46 | +0.1 | |
2,228,068 | + | DvMF_1825 | 0.59 | +0.1 | |
2,228,111 | + | DvMF_1825 | 0.63 | +0.6 | |
2,228,250 | - | DvMF_1825 | 0.77 | +1.2 | |
2,228,280 | - | DvMF_1825 | 0.80 | -0.0 | |
2,228,864 | - | DvMF_1826 | 0.37 | -0.1 | |
2,228,891 | + | DvMF_1826 | 0.39 | +0.3 | |
2,228,994 | - | DvMF_1826 | 0.50 | +0.2 | |
2,229,176 | - | DvMF_1826 | 0.68 | +0.3 | |
2,229,273 | + | DvMF_1826 | 0.77 | +0.3 | |
2,229,385 | + | DvMF_1826 | 0.89 | +0.1 | |
2,229,406 | - | +0.1 |
Or see this region's nucleotide sequence