Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_0230

Experiment: MoYLS4 with Spectinomycin 0.025 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDvMF_0229 and DvMF_0230 overlap by 15 nucleotidesDvMF_0230 and DvMF_0231 overlap by 8 nucleotides DvMF_0229: DvMF_0229 - DNA methylase N-4/N-6 domain protein (RefSeq), at 256,056 to 257,255 _0229 DvMF_0230: DvMF_0230 - McrBC 5-methylcytosine restriction system component-like protein (RefSeq), at 257,241 to 258,434 _0230 DvMF_0231: DvMF_0231 - ATPase associated with various cellular activities AAA_5 (RefSeq), at 258,427 to 259,959 _0231 Position (kb) 257 258 259Strain fitness (log2 ratio) -1 0 1at 257.403 kb on - strand, within DvMF_0230at 259.286 kb on - strand, within DvMF_0231

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Per-strain Table

Position Strand Gene LocusTag Fraction MoYLS4 with Spectinomycin 0.025 mg/ml
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257,403 - DvMF_0230 0.14 -0.1
259,286 - DvMF_0231 0.56 -0.1

Or see this region's nucleotide sequence