Experiment: D-Maltose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shew_0691 and Shew_0692 are separated by 4 nucleotides Shew_0692 and Shew_0693 are separated by 107 nucleotides Shew_0693 and Shew_0694 overlap by 4 nucleotides
Shew_0691: Shew_0691 - hypothetical protein (RefSeq), at 785,061 to 786,194
_0691
Shew_0692: Shew_0692 - hypothetical protein (RefSeq), at 786,199 to 787,119
_0692
Shew_0693: Shew_0693 - hypothetical protein (RefSeq), at 787,227 to 787,514
_0693
Shew_0694: Shew_0694 - hypothetical protein (RefSeq), at 787,511 to 788,452
_0694
Position (kb) 786
787
788 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 785.305 kb on - strand, within Shew_0691 at 785.305 kb on - strand, within Shew_0691 at 785.368 kb on + strand, within Shew_0691 at 785.368 kb on + strand, within Shew_0691 at 785.368 kb on + strand, within Shew_0691 at 785.376 kb on - strand, within Shew_0691 at 785.468 kb on - strand, within Shew_0691 at 785.558 kb on - strand, within Shew_0691 at 785.620 kb on + strand, within Shew_0691 at 785.620 kb on + strand, within Shew_0691 at 785.692 kb on - strand, within Shew_0691 at 785.977 kb on - strand, within Shew_0691 at 786.073 kb on + strand, within Shew_0691 at 786.091 kb on + strand at 786.504 kb on - strand, within Shew_0692 at 786.596 kb on - strand, within Shew_0692 at 786.755 kb on + strand, within Shew_0692 at 786.897 kb on + strand, within Shew_0692 at 787.174 kb on + strand at 787.475 kb on + strand, within Shew_0693 at 787.516 kb on - strand at 787.589 kb on + strand at 787.717 kb on - strand, within Shew_0694 at 787.765 kb on + strand, within Shew_0694 at 787.940 kb on - strand, within Shew_0694 at 788.002 kb on + strand, within Shew_0694
Per-strain Table
Position Strand Gene LocusTag Fraction D-Maltose (C) remove 785,305 - Shew_0691 0.22 -0.1 785,305 - Shew_0691 0.22 -1.5 785,368 + Shew_0691 0.27 +3.9 785,368 + Shew_0691 0.27 +0.1 785,368 + Shew_0691 0.27 +0.1 785,376 - Shew_0691 0.28 +0.8 785,468 - Shew_0691 0.36 -0.6 785,558 - Shew_0691 0.44 +0.6 785,620 + Shew_0691 0.49 +0.6 785,620 + Shew_0691 0.49 -1.9 785,692 - Shew_0691 0.56 +0.7 785,977 - Shew_0691 0.81 +0.3 786,073 + Shew_0691 0.89 -0.1 786,091 + +0.1 786,504 - Shew_0692 0.33 -0.4 786,596 - Shew_0692 0.43 +0.5 786,755 + Shew_0692 0.60 +0.2 786,897 + Shew_0692 0.76 +0.7 787,174 + -0.6 787,475 + Shew_0693 0.86 +0.2 787,516 - -0.3 787,589 + +0.3 787,717 - Shew_0694 0.22 +1.0 787,765 + Shew_0694 0.27 +0.1 787,940 - Shew_0694 0.46 -0.5 788,002 + Shew_0694 0.52 +0.6
Or see this region's nucleotide sequence