Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c19930

Experiment: m.b. Paraquat dichloride 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Paraquat dichloride 0.032 mg/ml
2,066,614	+				+0.8
2,066,695	+				-0.2
2,066,785	+		PGA1_c19920	0.12	-1.2
2,066,801	-		PGA1_c19920	0.14	-1.4
2,066,817	-		PGA1_c19920	0.16	+0.1
2,066,885	+		PGA1_c19920	0.23	-0.6
2,066,961	-		PGA1_c19920	0.31	-1.8
2,067,007	+		PGA1_c19920	0.36	-0.3
2,067,007	+		PGA1_c19920	0.36	-1.0
2,067,015	-		PGA1_c19920	0.36	+1.6
2,067,049	+		PGA1_c19920	0.40	+1.0
2,067,053	+		PGA1_c19920	0.40	+0.1
2,067,095	-		PGA1_c19920	0.45	+1.4
2,067,106	-		PGA1_c19920	0.46	+0.6
2,067,109	+		PGA1_c19920	0.46	-0.4
2,067,186	-		PGA1_c19920	0.54	-0.1
2,067,186	-		PGA1_c19920	0.54	+1.4
2,067,265	-		PGA1_c19920	0.63	+0.2
2,067,321	+		PGA1_c19920	0.69	+1.4
2,067,376	-		PGA1_c19920	0.74	-1.5
2,067,446	-		PGA1_c19920	0.82	-2.6
2,067,446	-		PGA1_c19920	0.82	+0.8
2,067,446	-		PGA1_c19920	0.82	-0.6
2,067,508	+		PGA1_c19920	0.88	+0.4
2,067,554	-				+2.0
2,067,611	-				-0.1
2,067,715	+		PGA1_c19930	0.11	-0.0
2,067,784	+		PGA1_c19930	0.18	-0.6
2,067,792	-		PGA1_c19930	0.19	+0.4
2,067,792	-		PGA1_c19930	0.19	-0.4
2,067,831	+		PGA1_c19930	0.23	-2.2
2,067,831	+		PGA1_c19930	0.23	-0.6
2,067,841	+		PGA1_c19930	0.24	-1.6
2,067,910	-		PGA1_c19930	0.31	-2.1
2,067,951	+		PGA1_c19930	0.35	+0.4
2,067,951	+		PGA1_c19930	0.35	-0.5
2,068,028	+		PGA1_c19930	0.43	-1.6
2,068,100	+		PGA1_c19930	0.51	-1.6
2,068,102	+		PGA1_c19930	0.51	-0.2
2,068,133	+		PGA1_c19930	0.54	-0.4
2,068,133	+		PGA1_c19930	0.54	+1.0
2,068,133	+		PGA1_c19930	0.54	-0.6
2,068,139	+		PGA1_c19930	0.55	+1.0
2,068,146	-		PGA1_c19930	0.55	-0.2
2,068,147	-		PGA1_c19930	0.55	-1.8
2,068,262	+		PGA1_c19930	0.67	+0.4
2,068,321	+		PGA1_c19930	0.73	-1.6
2,068,417	+		PGA1_c19930	0.83	+0.4
2,068,455	-		PGA1_c19930	0.87	-1.2
2,068,510	+				+2.4
2,068,511	-				-0.3
2,068,518	-				-0.6
2,068,518	-				-1.9
2,068,527	-				-1.6
2,068,528	-				-1.2
2,068,528	-				+2.4
2,068,547	-				-0.9
2,068,634	+				-0.6
2,068,634	-				-1.6
2,068,670	+				+1.0
2,068,746	+				-0.2
2,068,751	+				-0.1
2,068,767	-		PGA1_c19940	0.11	-0.6
2,068,843	+		PGA1_c19940	0.17	-1.6
2,068,874	-		PGA1_c19940	0.20	-1.6
2,068,930	+		PGA1_c19940	0.24	-1.6
2,068,938	-		PGA1_c19940	0.25	+0.1
2,068,942	+		PGA1_c19940	0.25	-1.9
2,068,947	+		PGA1_c19940	0.26	+0.4
2,068,948	-		PGA1_c19940	0.26	-1.2
2,069,033	+		PGA1_c19940	0.33	+1.4
2,069,033	+		PGA1_c19940	0.33	+1.0
2,069,033	+		PGA1_c19940	0.33	+0.6
2,069,033	+		PGA1_c19940	0.33	+0.4
2,069,033	+		PGA1_c19940	0.33	-0.0
2,069,033	+		PGA1_c19940	0.33	+2.2
2,069,033	+		PGA1_c19940	0.33	-0.6
2,069,033	+		PGA1_c19940	0.33	+1.0
2,069,033	+		PGA1_c19940	0.33	-2.2
2,069,033	+		PGA1_c19940	0.33	-0.2
2,069,041	-		PGA1_c19940	0.34	+0.4
2,069,041	-		PGA1_c19940	0.34	-0.6
2,069,058	+		PGA1_c19940	0.35	-0.6
2,069,106	-		PGA1_c19940	0.39	+1.4
2,069,106	-		PGA1_c19940	0.39	+0.1
2,069,128	-		PGA1_c19940	0.41	+0.8
2,069,135	+		PGA1_c19940	0.42	+0.4
2,069,177	-		PGA1_c19940	0.45	-1.9
2,069,225	+		PGA1_c19940	0.49	+0.4
2,069,271	-		PGA1_c19940	0.53	+0.1
2,069,343	+		PGA1_c19940	0.59	-0.3
2,069,346	-		PGA1_c19940	0.59	-0.3
2,069,469	+		PGA1_c19940	0.70	-0.2
2,069,481	+		PGA1_c19940	0.71	-1.2
2,069,487	-		PGA1_c19940	0.71	-1.2
2,069,487	-		PGA1_c19940	0.71	-0.9
2,069,489	+		PGA1_c19940	0.71	+1.0
2,069,504	-		PGA1_c19940	0.73	-1.7
2,069,510	+		PGA1_c19940	0.73	-0.6
2,069,538	+		PGA1_c19940	0.75	-0.8
2,069,539	+		PGA1_c19940	0.75	-0.6
2,069,546	-		PGA1_c19940	0.76	-2.2
2,069,546	-		PGA1_c19940	0.76	+1.4
2,069,546	-		PGA1_c19940	0.76	-0.6
2,069,547	-		PGA1_c19940	0.76	+0.4