Experiment: m.b. Paraquat dichloride 0.032 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PGA1_c11000 and PGA1_c11010 are separated by 1 nucleotides PGA1_c11010 and PGA1_c11020 overlap by 7 nucleotides PGA1_c11020 and PGA1_c11030 are separated by 133 nucleotides
PGA1_c11000: PGA1_c11000 - hypothetical protein, at 1,140,379 to 1,140,756
_c11000
PGA1_c11010: PGA1_c11010 - Predicted transcriptional regulator, at 1,140,758 to 1,141,120
_c11010
PGA1_c11020: PGA1_c11020 - hypothetical protein, at 1,141,114 to 1,141,749
_c11020
PGA1_c11030: PGA1_c11030 - MoxR-like ATPases, at 1,141,883 to 1,142,722
_c11030
Position (kb)
1141
1142 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1140.117 kb on - strand at 1140.147 kb on + strand at 1140.157 kb on + strand at 1140.157 kb on + strand at 1140.157 kb on + strand at 1140.157 kb on + strand at 1140.157 kb on + strand at 1140.157 kb on + strand at 1140.165 kb on - strand at 1140.165 kb on - strand at 1140.165 kb on - strand at 1140.165 kb on - strand at 1140.176 kb on - strand at 1140.235 kb on - strand at 1140.312 kb on + strand at 1140.320 kb on - strand at 1140.340 kb on - strand at 1140.358 kb on - strand at 1140.457 kb on + strand, within PGA1_c11000 at 1140.589 kb on + strand, within PGA1_c11000 at 1140.589 kb on + strand, within PGA1_c11000 at 1140.589 kb on + strand, within PGA1_c11000 at 1140.594 kb on + strand, within PGA1_c11000 at 1140.597 kb on - strand, within PGA1_c11000 at 1140.599 kb on + strand, within PGA1_c11000 at 1140.599 kb on + strand, within PGA1_c11000 at 1140.607 kb on - strand, within PGA1_c11000 at 1140.607 kb on - strand, within PGA1_c11000 at 1140.607 kb on - strand, within PGA1_c11000 at 1140.607 kb on - strand, within PGA1_c11000 at 1140.607 kb on - strand, within PGA1_c11000 at 1140.607 kb on - strand, within PGA1_c11000 at 1140.607 kb on - strand, within PGA1_c11000 at 1141.022 kb on - strand, within PGA1_c11010 at 1141.022 kb on - strand, within PGA1_c11010 at 1141.119 kb on - strand at 1141.137 kb on - strand at 1141.198 kb on - strand, within PGA1_c11020 at 1141.247 kb on - strand, within PGA1_c11020 at 1141.253 kb on + strand, within PGA1_c11020 at 1141.261 kb on - strand, within PGA1_c11020 at 1141.266 kb on + strand, within PGA1_c11020 at 1141.289 kb on + strand, within PGA1_c11020 at 1141.291 kb on - strand, within PGA1_c11020 at 1141.300 kb on + strand, within PGA1_c11020 at 1141.300 kb on + strand, within PGA1_c11020 at 1141.344 kb on - strand, within PGA1_c11020 at 1141.374 kb on - strand, within PGA1_c11020 at 1141.415 kb on + strand, within PGA1_c11020 at 1141.503 kb on + strand, within PGA1_c11020 at 1141.508 kb on + strand, within PGA1_c11020 at 1141.508 kb on + strand, within PGA1_c11020 at 1141.516 kb on - strand, within PGA1_c11020 at 1141.516 kb on - strand, within PGA1_c11020 at 1141.526 kb on - strand, within PGA1_c11020 at 1141.560 kb on - strand, within PGA1_c11020 at 1141.655 kb on + strand, within PGA1_c11020 at 1141.685 kb on - strand, within PGA1_c11020 at 1141.690 kb on + strand at 1141.742 kb on - strand at 1141.785 kb on - strand at 1141.864 kb on - strand at 1142.006 kb on + strand, within PGA1_c11030 at 1142.039 kb on + strand, within PGA1_c11030 at 1142.039 kb on + strand, within PGA1_c11030 at 1142.047 kb on + strand, within PGA1_c11030 at 1142.047 kb on + strand, within PGA1_c11030 at 1142.047 kb on - strand, within PGA1_c11030 at 1142.047 kb on - strand, within PGA1_c11030 at 1142.094 kb on + strand, within PGA1_c11030 at 1142.098 kb on - strand, within PGA1_c11030 at 1142.113 kb on - strand, within PGA1_c11030 at 1142.117 kb on + strand, within PGA1_c11030 at 1142.199 kb on - strand, within PGA1_c11030 at 1142.366 kb on - strand, within PGA1_c11030 at 1142.418 kb on + strand, within PGA1_c11030 at 1142.418 kb on + strand, within PGA1_c11030 at 1142.442 kb on - strand, within PGA1_c11030 at 1142.577 kb on - strand, within PGA1_c11030 at 1142.618 kb on - strand, within PGA1_c11030 at 1142.625 kb on + strand, within PGA1_c11030 at 1142.648 kb on - strand at 1142.702 kb on - strand at 1142.702 kb on - strand at 1142.741 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Paraquat dichloride 0.032 mg/ml remove 1,140,117 - -1.1 1,140,147 + +0.8 1,140,157 + +0.8 1,140,157 + +0.0 1,140,157 + -1.1 1,140,157 + -1.5 1,140,157 + -1.9 1,140,157 + -0.5 1,140,165 - +0.5 1,140,165 - +0.5 1,140,165 - -1.5 1,140,165 - -2.1 1,140,176 - -0.5 1,140,235 - -0.5 1,140,312 + +0.5 1,140,320 - +0.5 1,140,340 - +1.5 1,140,358 - +0.5 1,140,457 + PGA1_c11000 0.21 -0.9 1,140,589 + PGA1_c11000 0.56 -0.0 1,140,589 + PGA1_c11000 0.56 +1.5 1,140,589 + PGA1_c11000 0.56 +0.5 1,140,594 + PGA1_c11000 0.57 +0.5 1,140,597 - PGA1_c11000 0.58 +0.5 1,140,599 + PGA1_c11000 0.58 +0.0 1,140,599 + PGA1_c11000 0.58 +0.5 1,140,607 - PGA1_c11000 0.60 +0.5 1,140,607 - PGA1_c11000 0.60 -0.5 1,140,607 - PGA1_c11000 0.60 -1.5 1,140,607 - PGA1_c11000 0.60 +0.5 1,140,607 - PGA1_c11000 0.60 +0.0 1,140,607 - PGA1_c11000 0.60 -1.1 1,140,607 - PGA1_c11000 0.60 +0.5 1,141,022 - PGA1_c11010 0.73 -1.1 1,141,022 - PGA1_c11010 0.73 -0.5 1,141,119 - -1.9 1,141,137 - +2.5 1,141,198 - PGA1_c11020 0.13 +0.5 1,141,247 - PGA1_c11020 0.21 +0.5 1,141,253 + PGA1_c11020 0.22 +2.0 1,141,261 - PGA1_c11020 0.23 -2.4 1,141,266 + PGA1_c11020 0.24 -0.1 1,141,289 + PGA1_c11020 0.28 +1.2 1,141,291 - PGA1_c11020 0.28 -0.5 1,141,300 + PGA1_c11020 0.29 -1.5 1,141,300 + PGA1_c11020 0.29 -0.2 1,141,344 - PGA1_c11020 0.36 +1.5 1,141,374 - PGA1_c11020 0.41 -0.5 1,141,415 + PGA1_c11020 0.47 -1.4 1,141,503 + PGA1_c11020 0.61 +0.5 1,141,508 + PGA1_c11020 0.62 -1.3 1,141,508 + PGA1_c11020 0.62 -0.5 1,141,516 - PGA1_c11020 0.63 -0.5 1,141,516 - PGA1_c11020 0.63 -0.5 1,141,526 - PGA1_c11020 0.65 -0.9 1,141,560 - PGA1_c11020 0.70 -1.1 1,141,655 + PGA1_c11020 0.85 -0.1 1,141,685 - PGA1_c11020 0.90 -1.1 1,141,690 + +2.0 1,141,742 - -1.5 1,141,785 - -0.1 1,141,864 - -1.9 1,142,006 + PGA1_c11030 0.15 -0.5 1,142,039 + PGA1_c11030 0.19 +0.5 1,142,039 + PGA1_c11030 0.19 -1.4 1,142,047 + PGA1_c11030 0.20 -0.1 1,142,047 + PGA1_c11030 0.20 -0.8 1,142,047 - PGA1_c11030 0.20 -1.1 1,142,047 - PGA1_c11030 0.20 -1.5 1,142,094 + PGA1_c11030 0.25 +0.5 1,142,098 - PGA1_c11030 0.26 +1.5 1,142,113 - PGA1_c11030 0.27 -0.5 1,142,117 + PGA1_c11030 0.28 +0.0 1,142,199 - PGA1_c11030 0.38 -0.5 1,142,366 - PGA1_c11030 0.57 -1.5 1,142,418 + PGA1_c11030 0.64 +0.7 1,142,418 + PGA1_c11030 0.64 +0.5 1,142,442 - PGA1_c11030 0.67 +0.5 1,142,577 - PGA1_c11030 0.83 -0.5 1,142,618 - PGA1_c11030 0.88 -1.1 1,142,625 + PGA1_c11030 0.88 +0.8 1,142,648 - +1.0 1,142,702 - -1.1 1,142,702 - +2.0 1,142,741 + +0.5
Or see this region's nucleotide sequence