Strain Fitness in Shewanella loihica PV-4 around Shew_2679

Experiment: D-Maltose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Maltose (C)
3,171,277	+		Shew_2678	0.42	+1.2
3,171,381	+		Shew_2678	0.53	+0.2
3,171,457	+		Shew_2678	0.61	+0.9
3,171,465	-		Shew_2678	0.62	+0.8
3,171,613	-		Shew_2678	0.78	-0.3
3,171,632	-		Shew_2678	0.80	+0.3
3,171,663	+		Shew_2678	0.83	-0.3
3,171,835	-				-0.5
3,171,872	+				+0.1
3,172,119	-		Shew_2679	0.18	+0.5
3,172,223	-		Shew_2679	0.26	-3.1
3,172,261	+		Shew_2679	0.29	+0.1
3,172,334	+		Shew_2679	0.34	-5.3
3,172,340	-		Shew_2679	0.35	+0.0
3,172,340	-		Shew_2679	0.35	-0.0
3,172,410	+		Shew_2679	0.40	+0.7
3,172,496	-		Shew_2679	0.47	+0.2
3,172,620	+		Shew_2679	0.56	+0.6
3,172,745	+		Shew_2679	0.66	+0.8
3,172,935	+		Shew_2679	0.81	+0.3
3,173,127	-				-2.7
3,173,181	+				-0.7
3,173,223	+		Shew_2680	0.15	+0.0
3,173,223	+		Shew_2680	0.15	-0.4
3,173,231	-		Shew_2680	0.18	-0.2
3,173,233	+		Shew_2680	0.19	-0.4
3,173,252	-		Shew_2680	0.25	-0.1
3,173,281	-		Shew_2680	0.35	+1.9
3,173,281	-		Shew_2680	0.35	+0.2
3,173,295	+		Shew_2680	0.40	+0.3
3,173,295	+		Shew_2680	0.40	+1.2
3,173,301	+		Shew_2680	0.42	+0.2
3,173,301	+		Shew_2680	0.42	+1.0
3,173,329	+		Shew_2680	0.52	+1.7
3,173,332	-		Shew_2680	0.53	-0.5
3,173,332	-		Shew_2680	0.53	+0.0
3,173,337	-		Shew_2680	0.55	-0.6
3,173,342	-		Shew_2680	0.57	+0.6
3,173,342	-		Shew_2680	0.57	+0.6
3,173,355	-		Shew_2680	0.61	+0.2
3,173,381	+		Shew_2680	0.70	-0.9
3,173,381	+		Shew_2680	0.70	-0.2
3,173,406	-		Shew_2680	0.79	+0.8
3,173,415	-		Shew_2680	0.82	-0.2
3,173,431	+		Shew_2680	0.88	+1.1
3,173,434	-		Shew_2680	0.89	+0.2
3,173,446	+				-2.5
3,173,449	+				+1.9
3,173,452	-				-0.5
3,173,452	-				+0.1
3,173,469	-				+0.6
3,173,609	+				+1.5
3,173,609	+				+1.1
3,173,609	+				+0.4
3,173,609	+				+0.5
3,173,609	+				+0.6
3,173,609	+				+0.8
3,173,609	+				-2.1
3,173,609	+				-0.4
3,173,609	+				+0.5
3,173,609	+				+0.8
3,173,609	+				+3.0
3,173,609	+				+0.2
3,173,609	+				+0.1
3,173,609	+				+6.2
3,173,609	+				+0.2
3,173,609	+				+0.5
3,173,609	+				+0.3
3,173,609	+				-1.2
3,173,609	+				-2.4
3,173,609	+				+0.6
3,173,609	+				+0.2
3,173,609	+				-0.8
3,173,609	+				+0.4
3,173,609	+				+0.3
3,173,609	+				+1.2
3,173,609	+				-3.0
3,173,609	+				+0.3
3,173,609	+				+0.8
3,173,609	+				-0.4
3,173,609	+				-1.4
3,173,609	+				+0.7
3,173,609	+				-0.4
3,173,609	+				-2.4
3,173,609	+				-1.8
3,173,609	+				-3.7
3,173,609	+				-3.2
3,173,609	+				+0.3
3,173,609	+				-0.4
3,173,609	+				+0.1
3,173,609	+				+2.0
3,173,609	+				+0.9
3,173,609	+				+0.7
3,173,609	+				-0.3
3,173,609	+				+1.0
3,173,609	+				+1.0
3,173,609	+				+1.0
3,173,609	+				-0.3
3,173,609	+				+0.7
3,173,609	+				-0.7
3,173,609	+				+0.1
3,173,609	+				-0.6
3,173,609	+				+0.4
3,173,609	+				+0.7
3,173,609	+				+0.8
3,173,609	+				+1.2
3,173,609	+				-0.9
3,173,609	+				+1.5
3,173,609	+				+0.4
3,173,609	+				+0.4
3,173,617	-				-0.9
3,173,617	-				+0.9
3,173,617	-				-2.2
3,173,617	-				-2.7
3,173,617	-				+0.3
3,173,617	-				+0.8
3,173,617	-				-0.1
3,173,617	-				-0.3
3,173,617	-				+0.5
3,173,617	-				-0.2
3,173,617	-				-0.2
3,173,617	-				+0.5
3,173,617	-				-2.4
3,173,617	-				+0.3
3,173,617	-				+0.0
3,173,617	-				+0.1
3,173,617	-				-1.4
3,173,617	-				-0.6
3,173,617	-				-0.1
3,173,617	-				+0.8
3,173,617	-				-0.1
3,173,617	-				-0.6
3,173,617	-				-0.0
3,173,617	-				-0.1
3,173,617	-				+0.2
3,173,617	-				-0.0
3,173,617	-				-0.2
3,173,617	-				+0.5
3,173,617	-				-0.1
3,173,617	-				-0.0
3,173,617	-				+0.1
3,173,617	-				-1.8
3,173,617	-				+0.6
3,173,617	-				-0.5
3,173,617	-				+0.7
3,173,617	-				-0.4
3,173,617	-				-1.4
3,173,617	-				-0.2
3,173,617	-				-0.9
3,173,617	-				+2.0
3,173,617	-				+0.4
3,173,617	-				-0.1
3,173,617	-				-0.2
3,173,617	-				+0.4
3,173,617	-				-1.7
3,173,617	-				+0.3
3,173,628	+				-1.7
3,173,651	+				+0.6
3,173,651	+				-0.9
3,173,651	+				+0.1
3,173,651	+				+1.5
3,173,659	-				+0.6
3,173,659	-				+0.1
3,173,659	-				+0.4
3,173,659	-				+0.8
3,173,659	-				+0.2
3,173,659	-				-2.5
3,173,674	+				+0.3
3,173,722	+				-2.3
3,173,761	+				-0.9
3,173,769	-				+0.4
3,173,817	+				+0.4
3,173,828	+				+1.2
3,173,828	+				+0.8
3,173,828	+				+0.6
3,173,828	+				+0.2
3,173,836	-				+1.7
3,173,836	-				-0.5
3,173,863	+				+1.0
3,173,870	-				+0.6
3,173,877	-				-0.9
3,173,911	-				+0.2
3,173,929	+				+0.5
3,173,929	+				+0.6
3,173,929	+				+0.7
3,173,936	-				-0.0
3,173,949	+				+1.0
3,173,949	+				+1.0
3,173,958	-				+1.1
3,173,971	+		Shew_2681	0.10	-1.2
3,173,985	-		Shew_2681	0.11	+1.3
3,173,998	+		Shew_2681	0.12	+0.4
3,173,999	+		Shew_2681	0.12	-1.5
3,174,006	-		Shew_2681	0.13	+0.1
3,174,006	-		Shew_2681	0.13	+0.6
3,174,007	-		Shew_2681	0.13	+0.6
3,174,008	+		Shew_2681	0.13	+1.4
3,174,011	-		Shew_2681	0.13	+0.3
3,174,016	-		Shew_2681	0.14	+3.5
3,174,024	-		Shew_2681	0.14	-2.4
3,174,035	+		Shew_2681	0.15	+0.6
3,174,043	-		Shew_2681	0.16	+3.2
3,174,100	-		Shew_2681	0.20	-0.5
3,174,128	-		Shew_2681	0.22	-2.6