Experiment: D-Maltose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shew_0366 and Shew_0367 overlap by 1 nucleotides Shew_0367 and Shew_0368 overlap by 4 nucleotides Shew_0368 and Shew_0369 overlap by 4 nucleotides Shew_0369 and Shew_0370 are separated by 10 nucleotides
Shew_0366: Shew_0366 - ubiquinol oxidase, subunit II (RefSeq), at 414,288 to 415,238
_0366
Shew_0367: Shew_0367 - cytochrome-c oxidase (RefSeq), at 415,238 to 417,226
_0367
Shew_0368: Shew_0368 - cytochrome c oxidase, subunit III (RefSeq), at 417,223 to 417,849
_0368
Shew_0369: Shew_0369 - cytochrome C oxidase subunit IV (RefSeq), at 417,846 to 418,172
_0369
Shew_0370: Shew_0370 - protoheme IX farnesyltransferase (RefSeq), at 418,183 to 419,109
_0370
Position (kb) 415
416
417
418 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 414.338 kb on - strand at 414.347 kb on + strand at 414.452 kb on + strand, within Shew_0366 at 414.783 kb on + strand, within Shew_0366 at 414.783 kb on + strand, within Shew_0366 at 414.829 kb on - strand, within Shew_0366 at 415.257 kb on + strand at 415.636 kb on - strand, within Shew_0367 at 415.663 kb on - strand, within Shew_0367 at 416.096 kb on + strand, within Shew_0367 at 416.106 kb on - strand, within Shew_0367 at 416.208 kb on - strand, within Shew_0367 at 416.539 kb on - strand, within Shew_0367 at 416.782 kb on - strand, within Shew_0367 at 416.867 kb on - strand, within Shew_0367 at 416.911 kb on + strand, within Shew_0367 at 416.919 kb on - strand, within Shew_0367 at 416.964 kb on - strand, within Shew_0367 at 417.047 kb on + strand at 417.083 kb on - strand at 417.251 kb on + strand at 417.259 kb on - strand at 417.303 kb on - strand, within Shew_0368 at 417.470 kb on - strand, within Shew_0368 at 417.550 kb on + strand, within Shew_0368 at 417.558 kb on - strand, within Shew_0368 at 417.572 kb on + strand, within Shew_0368 at 417.580 kb on - strand, within Shew_0368 at 417.922 kb on + strand, within Shew_0369 at 417.944 kb on + strand, within Shew_0369 at 418.128 kb on - strand, within Shew_0369
Per-strain Table
Position Strand Gene LocusTag Fraction D-Maltose (C) remove 414,338 - -0.5 414,347 + -0.0 414,452 + Shew_0366 0.17 +0.2 414,783 + Shew_0366 0.52 -1.4 414,783 + Shew_0366 0.52 -2.2 414,829 - Shew_0366 0.57 +0.2 415,257 + +0.1 415,636 - Shew_0367 0.20 +1.1 415,663 - Shew_0367 0.21 -2.7 416,096 + Shew_0367 0.43 -0.5 416,106 - Shew_0367 0.44 -2.1 416,208 - Shew_0367 0.49 -0.5 416,539 - Shew_0367 0.65 -0.3 416,782 - Shew_0367 0.78 -1.1 416,867 - Shew_0367 0.82 -0.0 416,911 + Shew_0367 0.84 -0.1 416,919 - Shew_0367 0.85 -0.2 416,964 - Shew_0367 0.87 -0.4 417,047 + +1.6 417,083 - -0.8 417,251 + -1.5 417,259 - -3.2 417,303 - Shew_0368 0.13 -0.9 417,470 - Shew_0368 0.39 +0.7 417,550 + Shew_0368 0.52 +1.0 417,558 - Shew_0368 0.53 +0.4 417,572 + Shew_0368 0.56 -0.3 417,580 - Shew_0368 0.57 +1.5 417,922 + Shew_0369 0.23 +0.1 417,944 + Shew_0369 0.30 +0.6 418,128 - Shew_0369 0.86 +2.1
Or see this region's nucleotide sequence