Experiment: L-Phenylalanine as (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_503 and HP15_504 overlap by 8 nucleotides HP15_504 and HP15_505 are separated by 243 nucleotides HP15_505 and HP15_506 are separated by 102 nucleotides HP15_506 and HP15_507 are separated by 144 nucleotides
HP15_503: HP15_503 - glutathione S-transferase protein, at 515,771 to 516,757
_503
HP15_504: HP15_504 - trans-hexaprenyltranstransferase, at 516,750 to 517,718
_504
HP15_505: HP15_505 - ribosomal protein L21, at 517,962 to 518,273
_505
HP15_506: HP15_506 - ribosomal protein L27, at 518,376 to 518,570
_506
HP15_507: HP15_507 - GTPase ObgE, at 518,715 to 519,908
_507
Position (kb) 516
517
518 Strain fitness (log2 ratio) -1
0
1
2
3 at 515.777 kb on - strand at 515.958 kb on + strand, within HP15_503 at 516.007 kb on - strand, within HP15_503 at 516.034 kb on - strand, within HP15_503 at 516.121 kb on + strand, within HP15_503 at 516.121 kb on + strand, within HP15_503 at 516.129 kb on - strand, within HP15_503 at 516.129 kb on - strand, within HP15_503 at 516.135 kb on - strand, within HP15_503 at 516.164 kb on - strand, within HP15_503 at 516.253 kb on + strand, within HP15_503 at 516.260 kb on - strand, within HP15_503 at 516.382 kb on + strand, within HP15_503 at 516.395 kb on - strand, within HP15_503 at 516.406 kb on - strand at 516.429 kb on + strand, within HP15_503 at 516.450 kb on - strand, within HP15_503 at 516.535 kb on - strand, within HP15_503 at 516.646 kb on + strand, within HP15_503
Per-strain Table
Position Strand Gene LocusTag Fraction L-Phenylalanine as (N) remove 515,777 - -0.5 515,958 + HP15_503 0.19 -0.5 516,007 - HP15_503 0.24 +1.1 516,034 - HP15_503 0.27 -0.2 516,121 + HP15_503 0.35 -0.7 516,121 + HP15_503 0.35 +0.3 516,129 - HP15_503 0.36 +0.6 516,129 - HP15_503 0.36 -0.3 516,135 - HP15_503 0.37 -0.4 516,164 - HP15_503 0.40 -0.7 516,253 + HP15_503 0.49 -0.1 516,260 - HP15_503 0.50 +0.7 516,382 + HP15_503 0.62 +0.7 516,395 - HP15_503 0.63 +1.1 516,406 - +3.3 516,429 + HP15_503 0.67 +1.1 516,450 - HP15_503 0.69 -0.4 516,535 - HP15_503 0.77 +0.7 516,646 + HP15_503 0.89 -0.2
Or see this region's nucleotide sequence