Strain Fitness in Marinobacter adhaerens HP15 around HP15_3798

Experiment: L-Phenylalanine as (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_3797 and HP15_3798 are separated by 13 nucleotidesHP15_3798 and HP15_3799 are separated by 16 nucleotides HP15_3797: HP15_3797 - TRAP-type mannitol/chloroaromatic compound transport system, large permease component, at 4,019,841 to 4,021,205 _3797 HP15_3798: HP15_3798 - 3-hydroxybutyrate dehydrogenase, at 4,021,219 to 4,021,998 _3798 HP15_3799: HP15_3799 - acetyl-CoA synthetase, at 4,022,015 to 4,024,003 _3799 Position (kb) 4021 4022Strain fitness (log2 ratio) -1 0 1 2at 4020.299 kb on - strand, within HP15_3797at 4020.308 kb on + strand, within HP15_3797at 4020.424 kb on - strand, within HP15_3797at 4020.439 kb on + strand, within HP15_3797at 4020.439 kb on + strand, within HP15_3797at 4020.441 kb on - strand, within HP15_3797at 4020.447 kb on - strand, within HP15_3797at 4020.466 kb on - strand, within HP15_3797at 4020.512 kb on + strand, within HP15_3797at 4020.520 kb on - strand, within HP15_3797at 4020.546 kb on - strand, within HP15_3797at 4020.573 kb on - strand, within HP15_3797at 4020.638 kb on + strand, within HP15_3797at 4020.646 kb on - strand, within HP15_3797at 4020.648 kb on - strand, within HP15_3797at 4020.675 kb on + strand, within HP15_3797at 4020.675 kb on + strand, within HP15_3797at 4020.699 kb on - strand, within HP15_3797at 4020.703 kb on - strand, within HP15_3797at 4020.739 kb on + strand, within HP15_3797at 4020.784 kb on + strand, within HP15_3797at 4020.805 kb on - strand, within HP15_3797at 4020.819 kb on + strand, within HP15_3797at 4020.835 kb on - strand, within HP15_3797at 4020.864 kb on + strand, within HP15_3797at 4020.867 kb on - strand, within HP15_3797at 4020.898 kb on + strand, within HP15_3797at 4020.913 kb on + strand, within HP15_3797at 4020.970 kb on + strand, within HP15_3797at 4020.970 kb on + strand, within HP15_3797at 4020.970 kb on + strand, within HP15_3797at 4020.975 kb on + strand, within HP15_3797at 4021.042 kb on + strand, within HP15_3797at 4021.042 kb on + strand, within HP15_3797at 4021.052 kb on + strand, within HP15_3797at 4021.052 kb on + strand, within HP15_3797at 4021.052 kb on + strand, within HP15_3797at 4021.052 kb on + strand, within HP15_3797at 4021.052 kb on + strand, within HP15_3797at 4021.060 kb on - strand, within HP15_3797at 4021.060 kb on - strand, within HP15_3797at 4021.060 kb on - strand, within HP15_3797at 4021.060 kb on - strand, within HP15_3797at 4021.060 kb on - strand, within HP15_3797at 4021.060 kb on - strand, within HP15_3797at 4021.060 kb on - strand, within HP15_3797at 4021.060 kb on - strand, within HP15_3797at 4021.085 kb on - strandat 4021.108 kb on + strandat 4021.108 kb on + strandat 4021.108 kb on + strandat 4021.148 kb on - strandat 4021.187 kb on - strandat 4021.342 kb on + strand, within HP15_3798at 4021.342 kb on + strand, within HP15_3798at 4021.342 kb on + strand, within HP15_3798at 4021.350 kb on - strand, within HP15_3798at 4021.352 kb on + strand, within HP15_3798at 4021.360 kb on - strand, within HP15_3798at 4021.379 kb on - strand, within HP15_3798at 4021.392 kb on - strand, within HP15_3798at 4021.462 kb on + strand, within HP15_3798at 4021.462 kb on + strand, within HP15_3798at 4021.462 kb on + strand, within HP15_3798at 4021.493 kb on - strand, within HP15_3798at 4021.521 kb on + strand, within HP15_3798at 4021.631 kb on + strand, within HP15_3798at 4021.741 kb on - strand, within HP15_3798at 4021.772 kb on + strand, within HP15_3798at 4021.784 kb on + strand, within HP15_3798at 4021.813 kb on - strand, within HP15_3798at 4021.823 kb on - strand, within HP15_3798at 4021.864 kb on + strand, within HP15_3798at 4021.880 kb on - strand, within HP15_3798at 4021.896 kb on + strand, within HP15_3798at 4021.896 kb on + strand, within HP15_3798at 4021.903 kb on - strand, within HP15_3798at 4021.965 kb on - strandat 4022.024 kb on + strandat 4022.089 kb on + strandat 4022.089 kb on + strandat 4022.097 kb on - strandat 4022.134 kb on + strandat 4022.142 kb on - strandat 4022.142 kb on - strandat 4022.144 kb on + strandat 4022.144 kb on - strandat 4022.207 kb on - strandat 4022.208 kb on - strandat 4022.311 kb on - strand, within HP15_3799at 4022.353 kb on - strand, within HP15_3799at 4022.372 kb on + strand, within HP15_3799at 4022.375 kb on - strand, within HP15_3799at 4022.424 kb on - strand, within HP15_3799at 4022.520 kb on + strand, within HP15_3799at 4022.570 kb on + strand, within HP15_3799at 4022.603 kb on + strand, within HP15_3799at 4022.611 kb on - strand, within HP15_3799at 4022.659 kb on + strand, within HP15_3799at 4022.703 kb on + strand, within HP15_3799at 4022.795 kb on + strand, within HP15_3799at 4022.803 kb on + strand, within HP15_3799

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Phenylalanine as (N)
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4,020,299 - HP15_3797 0.34 -0.8
4,020,308 + HP15_3797 0.34 +0.3
4,020,424 - HP15_3797 0.43 +1.0
4,020,439 + HP15_3797 0.44 +1.4
4,020,439 + HP15_3797 0.44 +1.0
4,020,441 - HP15_3797 0.44 -1.5
4,020,447 - HP15_3797 0.44 -0.8
4,020,466 - HP15_3797 0.46 -0.3
4,020,512 + HP15_3797 0.49 +0.7
4,020,520 - HP15_3797 0.50 +0.3
4,020,546 - HP15_3797 0.52 -0.2
4,020,573 - HP15_3797 0.54 -0.8
4,020,638 + HP15_3797 0.58 +0.4
4,020,646 - HP15_3797 0.59 +0.1
4,020,648 - HP15_3797 0.59 -0.2
4,020,675 + HP15_3797 0.61 -0.1
4,020,675 + HP15_3797 0.61 -0.9
4,020,699 - HP15_3797 0.63 -0.3
4,020,703 - HP15_3797 0.63 +1.3
4,020,739 + HP15_3797 0.66 -0.6
4,020,784 + HP15_3797 0.69 -0.3
4,020,805 - HP15_3797 0.71 +0.4
4,020,819 + HP15_3797 0.72 +0.6
4,020,835 - HP15_3797 0.73 -0.1
4,020,864 + HP15_3797 0.75 -1.3
4,020,867 - HP15_3797 0.75 -0.6
4,020,898 + HP15_3797 0.77 +0.3
4,020,913 + HP15_3797 0.79 +0.7
4,020,970 + HP15_3797 0.83 -0.3
4,020,970 + HP15_3797 0.83 -0.2
4,020,970 + HP15_3797 0.83 +2.1
4,020,975 + HP15_3797 0.83 +0.1
4,021,042 + HP15_3797 0.88 +1.9
4,021,042 + HP15_3797 0.88 +0.3
4,021,052 + HP15_3797 0.89 -0.2
4,021,052 + HP15_3797 0.89 +1.3
4,021,052 + HP15_3797 0.89 +1.2
4,021,052 + HP15_3797 0.89 -0.0
4,021,052 + HP15_3797 0.89 -0.2
4,021,060 - HP15_3797 0.89 -1.4
4,021,060 - HP15_3797 0.89 -0.7
4,021,060 - HP15_3797 0.89 -0.5
4,021,060 - HP15_3797 0.89 -0.6
4,021,060 - HP15_3797 0.89 +0.4
4,021,060 - HP15_3797 0.89 +1.3
4,021,060 - HP15_3797 0.89 -0.0
4,021,060 - HP15_3797 0.89 +1.2
4,021,085 - +0.4
4,021,108 + -0.5
4,021,108 + +1.5
4,021,108 + +1.4
4,021,148 - -0.2
4,021,187 - +0.9
4,021,342 + HP15_3798 0.16 -0.3
4,021,342 + HP15_3798 0.16 -0.3
4,021,342 + HP15_3798 0.16 -0.9
4,021,350 - HP15_3798 0.17 -0.2
4,021,352 + HP15_3798 0.17 -0.8
4,021,360 - HP15_3798 0.18 -0.6
4,021,379 - HP15_3798 0.21 -1.3
4,021,392 - HP15_3798 0.22 +0.8
4,021,462 + HP15_3798 0.31 +1.5
4,021,462 + HP15_3798 0.31 -0.3
4,021,462 + HP15_3798 0.31 -0.4
4,021,493 - HP15_3798 0.35 +0.2
4,021,521 + HP15_3798 0.39 -0.4
4,021,631 + HP15_3798 0.53 -0.5
4,021,741 - HP15_3798 0.67 +1.3
4,021,772 + HP15_3798 0.71 -0.4
4,021,784 + HP15_3798 0.72 -0.5
4,021,813 - HP15_3798 0.76 +1.4
4,021,823 - HP15_3798 0.77 +0.2
4,021,864 + HP15_3798 0.83 -0.3
4,021,880 - HP15_3798 0.85 -0.7
4,021,896 + HP15_3798 0.87 +0.6
4,021,896 + HP15_3798 0.87 +0.6
4,021,903 - HP15_3798 0.88 +1.6
4,021,965 - +1.4
4,022,024 + +0.3
4,022,089 + -0.3
4,022,089 + -0.9
4,022,097 - +0.8
4,022,134 + -0.3
4,022,142 - +0.1
4,022,142 - +0.2
4,022,144 + -1.0
4,022,144 - +1.7
4,022,207 - +1.3
4,022,208 - +0.9
4,022,311 - HP15_3799 0.15 -0.5
4,022,353 - HP15_3799 0.17 +1.4
4,022,372 + HP15_3799 0.18 +0.2
4,022,375 - HP15_3799 0.18 -1.2
4,022,424 - HP15_3799 0.21 +1.2
4,022,520 + HP15_3799 0.25 +1.4
4,022,570 + HP15_3799 0.28 +0.8
4,022,603 + HP15_3799 0.30 +1.8
4,022,611 - HP15_3799 0.30 -0.2
4,022,659 + HP15_3799 0.32 -0.4
4,022,703 + HP15_3799 0.35 -0.2
4,022,795 + HP15_3799 0.39 +0.1
4,022,803 + HP15_3799 0.40 -0.1

Or see this region's nucleotide sequence