Experiment: L-Phenylalanine as (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_3797 and HP15_3798 are separated by 13 nucleotides HP15_3798 and HP15_3799 are separated by 16 nucleotides
HP15_3797: HP15_3797 - TRAP-type mannitol/chloroaromatic compound transport system, large permease component, at 4,019,841 to 4,021,205
_3797
HP15_3798: HP15_3798 - 3-hydroxybutyrate dehydrogenase, at 4,021,219 to 4,021,998
_3798
HP15_3799: HP15_3799 - acetyl-CoA synthetase, at 4,022,015 to 4,024,003
_3799
Position (kb)
4021
4022 Strain fitness (log2 ratio)
-1
0
1
2 at 4020.299 kb on - strand, within HP15_3797 at 4020.308 kb on + strand, within HP15_3797 at 4020.424 kb on - strand, within HP15_3797 at 4020.439 kb on + strand, within HP15_3797 at 4020.439 kb on + strand, within HP15_3797 at 4020.441 kb on - strand, within HP15_3797 at 4020.447 kb on - strand, within HP15_3797 at 4020.466 kb on - strand, within HP15_3797 at 4020.512 kb on + strand, within HP15_3797 at 4020.520 kb on - strand, within HP15_3797 at 4020.546 kb on - strand, within HP15_3797 at 4020.573 kb on - strand, within HP15_3797 at 4020.638 kb on + strand, within HP15_3797 at 4020.646 kb on - strand, within HP15_3797 at 4020.648 kb on - strand, within HP15_3797 at 4020.675 kb on + strand, within HP15_3797 at 4020.675 kb on + strand, within HP15_3797 at 4020.699 kb on - strand, within HP15_3797 at 4020.703 kb on - strand, within HP15_3797 at 4020.739 kb on + strand, within HP15_3797 at 4020.784 kb on + strand, within HP15_3797 at 4020.805 kb on - strand, within HP15_3797 at 4020.819 kb on + strand, within HP15_3797 at 4020.835 kb on - strand, within HP15_3797 at 4020.864 kb on + strand, within HP15_3797 at 4020.867 kb on - strand, within HP15_3797 at 4020.898 kb on + strand, within HP15_3797 at 4020.913 kb on + strand, within HP15_3797 at 4020.970 kb on + strand, within HP15_3797 at 4020.970 kb on + strand, within HP15_3797 at 4020.970 kb on + strand, within HP15_3797 at 4020.975 kb on + strand, within HP15_3797 at 4021.042 kb on + strand, within HP15_3797 at 4021.042 kb on + strand, within HP15_3797 at 4021.052 kb on + strand, within HP15_3797 at 4021.052 kb on + strand, within HP15_3797 at 4021.052 kb on + strand, within HP15_3797 at 4021.052 kb on + strand, within HP15_3797 at 4021.052 kb on + strand, within HP15_3797 at 4021.060 kb on - strand, within HP15_3797 at 4021.060 kb on - strand, within HP15_3797 at 4021.060 kb on - strand, within HP15_3797 at 4021.060 kb on - strand, within HP15_3797 at 4021.060 kb on - strand, within HP15_3797 at 4021.060 kb on - strand, within HP15_3797 at 4021.060 kb on - strand, within HP15_3797 at 4021.060 kb on - strand, within HP15_3797 at 4021.085 kb on - strand at 4021.108 kb on + strand at 4021.108 kb on + strand at 4021.108 kb on + strand at 4021.148 kb on - strand at 4021.187 kb on - strand at 4021.342 kb on + strand, within HP15_3798 at 4021.342 kb on + strand, within HP15_3798 at 4021.342 kb on + strand, within HP15_3798 at 4021.350 kb on - strand, within HP15_3798 at 4021.352 kb on + strand, within HP15_3798 at 4021.360 kb on - strand, within HP15_3798 at 4021.379 kb on - strand, within HP15_3798 at 4021.392 kb on - strand, within HP15_3798 at 4021.462 kb on + strand, within HP15_3798 at 4021.462 kb on + strand, within HP15_3798 at 4021.462 kb on + strand, within HP15_3798 at 4021.493 kb on - strand, within HP15_3798 at 4021.521 kb on + strand, within HP15_3798 at 4021.631 kb on + strand, within HP15_3798 at 4021.741 kb on - strand, within HP15_3798 at 4021.772 kb on + strand, within HP15_3798 at 4021.784 kb on + strand, within HP15_3798 at 4021.813 kb on - strand, within HP15_3798 at 4021.823 kb on - strand, within HP15_3798 at 4021.864 kb on + strand, within HP15_3798 at 4021.880 kb on - strand, within HP15_3798 at 4021.896 kb on + strand, within HP15_3798 at 4021.896 kb on + strand, within HP15_3798 at 4021.903 kb on - strand, within HP15_3798 at 4021.965 kb on - strand at 4022.024 kb on + strand at 4022.089 kb on + strand at 4022.089 kb on + strand at 4022.097 kb on - strand at 4022.134 kb on + strand at 4022.142 kb on - strand at 4022.142 kb on - strand at 4022.144 kb on + strand at 4022.144 kb on - strand at 4022.207 kb on - strand at 4022.208 kb on - strand at 4022.311 kb on - strand, within HP15_3799 at 4022.353 kb on - strand, within HP15_3799 at 4022.372 kb on + strand, within HP15_3799 at 4022.375 kb on - strand, within HP15_3799 at 4022.424 kb on - strand, within HP15_3799 at 4022.520 kb on + strand, within HP15_3799 at 4022.570 kb on + strand, within HP15_3799 at 4022.603 kb on + strand, within HP15_3799 at 4022.611 kb on - strand, within HP15_3799 at 4022.659 kb on + strand, within HP15_3799 at 4022.703 kb on + strand, within HP15_3799 at 4022.795 kb on + strand, within HP15_3799 at 4022.803 kb on + strand, within HP15_3799
Per-strain Table
Position Strand Gene LocusTag Fraction L-Phenylalanine as (N) remove 4,020,299 - HP15_3797 0.34 -0.8 4,020,308 + HP15_3797 0.34 +0.3 4,020,424 - HP15_3797 0.43 +1.0 4,020,439 + HP15_3797 0.44 +1.4 4,020,439 + HP15_3797 0.44 +1.0 4,020,441 - HP15_3797 0.44 -1.5 4,020,447 - HP15_3797 0.44 -0.8 4,020,466 - HP15_3797 0.46 -0.3 4,020,512 + HP15_3797 0.49 +0.7 4,020,520 - HP15_3797 0.50 +0.3 4,020,546 - HP15_3797 0.52 -0.2 4,020,573 - HP15_3797 0.54 -0.8 4,020,638 + HP15_3797 0.58 +0.4 4,020,646 - HP15_3797 0.59 +0.1 4,020,648 - HP15_3797 0.59 -0.2 4,020,675 + HP15_3797 0.61 -0.1 4,020,675 + HP15_3797 0.61 -0.9 4,020,699 - HP15_3797 0.63 -0.3 4,020,703 - HP15_3797 0.63 +1.3 4,020,739 + HP15_3797 0.66 -0.6 4,020,784 + HP15_3797 0.69 -0.3 4,020,805 - HP15_3797 0.71 +0.4 4,020,819 + HP15_3797 0.72 +0.6 4,020,835 - HP15_3797 0.73 -0.1 4,020,864 + HP15_3797 0.75 -1.3 4,020,867 - HP15_3797 0.75 -0.6 4,020,898 + HP15_3797 0.77 +0.3 4,020,913 + HP15_3797 0.79 +0.7 4,020,970 + HP15_3797 0.83 -0.3 4,020,970 + HP15_3797 0.83 -0.2 4,020,970 + HP15_3797 0.83 +2.1 4,020,975 + HP15_3797 0.83 +0.1 4,021,042 + HP15_3797 0.88 +1.9 4,021,042 + HP15_3797 0.88 +0.3 4,021,052 + HP15_3797 0.89 -0.2 4,021,052 + HP15_3797 0.89 +1.3 4,021,052 + HP15_3797 0.89 +1.2 4,021,052 + HP15_3797 0.89 -0.0 4,021,052 + HP15_3797 0.89 -0.2 4,021,060 - HP15_3797 0.89 -1.4 4,021,060 - HP15_3797 0.89 -0.7 4,021,060 - HP15_3797 0.89 -0.5 4,021,060 - HP15_3797 0.89 -0.6 4,021,060 - HP15_3797 0.89 +0.4 4,021,060 - HP15_3797 0.89 +1.3 4,021,060 - HP15_3797 0.89 -0.0 4,021,060 - HP15_3797 0.89 +1.2 4,021,085 - +0.4 4,021,108 + -0.5 4,021,108 + +1.5 4,021,108 + +1.4 4,021,148 - -0.2 4,021,187 - +0.9 4,021,342 + HP15_3798 0.16 -0.3 4,021,342 + HP15_3798 0.16 -0.3 4,021,342 + HP15_3798 0.16 -0.9 4,021,350 - HP15_3798 0.17 -0.2 4,021,352 + HP15_3798 0.17 -0.8 4,021,360 - HP15_3798 0.18 -0.6 4,021,379 - HP15_3798 0.21 -1.3 4,021,392 - HP15_3798 0.22 +0.8 4,021,462 + HP15_3798 0.31 +1.5 4,021,462 + HP15_3798 0.31 -0.3 4,021,462 + HP15_3798 0.31 -0.4 4,021,493 - HP15_3798 0.35 +0.2 4,021,521 + HP15_3798 0.39 -0.4 4,021,631 + HP15_3798 0.53 -0.5 4,021,741 - HP15_3798 0.67 +1.3 4,021,772 + HP15_3798 0.71 -0.4 4,021,784 + HP15_3798 0.72 -0.5 4,021,813 - HP15_3798 0.76 +1.4 4,021,823 - HP15_3798 0.77 +0.2 4,021,864 + HP15_3798 0.83 -0.3 4,021,880 - HP15_3798 0.85 -0.7 4,021,896 + HP15_3798 0.87 +0.6 4,021,896 + HP15_3798 0.87 +0.6 4,021,903 - HP15_3798 0.88 +1.6 4,021,965 - +1.4 4,022,024 + +0.3 4,022,089 + -0.3 4,022,089 + -0.9 4,022,097 - +0.8 4,022,134 + -0.3 4,022,142 - +0.1 4,022,142 - +0.2 4,022,144 + -1.0 4,022,144 - +1.7 4,022,207 - +1.3 4,022,208 - +0.9 4,022,311 - HP15_3799 0.15 -0.5 4,022,353 - HP15_3799 0.17 +1.4 4,022,372 + HP15_3799 0.18 +0.2 4,022,375 - HP15_3799 0.18 -1.2 4,022,424 - HP15_3799 0.21 +1.2 4,022,520 + HP15_3799 0.25 +1.4 4,022,570 + HP15_3799 0.28 +0.8 4,022,603 + HP15_3799 0.30 +1.8 4,022,611 - HP15_3799 0.30 -0.2 4,022,659 + HP15_3799 0.32 -0.4 4,022,703 + HP15_3799 0.35 -0.2 4,022,795 + HP15_3799 0.39 +0.1 4,022,803 + HP15_3799 0.40 -0.1
Or see this region's nucleotide sequence