Strain Fitness in Marinobacter adhaerens HP15 around HP15_3708

Experiment: L-Phenylalanine as (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_3707 and HP15_3708 are separated by 205 nucleotidesHP15_3708 and HP15_3709 are separated by 89 nucleotides HP15_3707: HP15_3707 - uncharacterized conserved protein UCP028137, membrane, at 3,913,723 to 3,914,487 _3707 HP15_3708: HP15_3708 - 4-aminobutyrate aminotransferase, at 3,914,693 to 3,915,970 _3708 HP15_3709: HP15_3709 - lipid A ABC transporter ATPase/inner membrane protein, at 3,916,060 to 3,917,732 _3709 Position (kb) 3914 3915 3916Strain fitness (log2 ratio) -1 0 1at 3914.613 kb on + strandat 3914.622 kb on - strandat 3914.689 kb on - strandat 3914.780 kb on + strandat 3914.787 kb on + strandat 3914.795 kb on - strandat 3915.027 kb on - strand, within HP15_3708at 3915.049 kb on + strand, within HP15_3708at 3915.052 kb on - strand, within HP15_3708at 3915.092 kb on - strand, within HP15_3708at 3915.103 kb on + strand, within HP15_3708at 3915.114 kb on + strand, within HP15_3708at 3915.170 kb on - strand, within HP15_3708at 3915.229 kb on - strand, within HP15_3708at 3915.253 kb on - strand, within HP15_3708at 3915.339 kb on + strand, within HP15_3708at 3915.347 kb on - strand, within HP15_3708at 3915.377 kb on + strand, within HP15_3708at 3915.377 kb on + strand, within HP15_3708at 3915.385 kb on - strand, within HP15_3708at 3915.527 kb on - strand, within HP15_3708at 3915.690 kb on + strand, within HP15_3708at 3915.730 kb on + strand, within HP15_3708at 3915.820 kb on + strand, within HP15_3708at 3915.866 kb on + strandat 3915.871 kb on + strandat 3915.930 kb on + strandat 3915.986 kb on + strandat 3915.988 kb on + strandat 3916.093 kb on - strandat 3916.120 kb on + strandat 3916.164 kb on - strandat 3916.297 kb on - strand, within HP15_3709at 3916.320 kb on - strand, within HP15_3709at 3916.327 kb on + strand, within HP15_3709at 3916.359 kb on + strand, within HP15_3709at 3916.378 kb on + strand, within HP15_3709at 3916.378 kb on + strand, within HP15_3709at 3916.536 kb on - strand, within HP15_3709at 3916.577 kb on + strand, within HP15_3709at 3916.622 kb on - strand, within HP15_3709at 3916.697 kb on + strand, within HP15_3709at 3916.712 kb on + strand, within HP15_3709at 3916.749 kb on + strand, within HP15_3709at 3916.799 kb on - strand, within HP15_3709at 3916.856 kb on + strand, within HP15_3709at 3916.856 kb on + strand, within HP15_3709at 3916.866 kb on + strand, within HP15_3709at 3916.965 kb on - strand, within HP15_3709

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Phenylalanine as (N)
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3,914,613 + +1.2
3,914,622 - +0.3
3,914,689 - +1.1
3,914,780 + -0.3
3,914,787 + +1.0
3,914,795 - +0.3
3,915,027 - HP15_3708 0.26 +0.5
3,915,049 + HP15_3708 0.28 -0.2
3,915,052 - HP15_3708 0.28 +0.7
3,915,092 - HP15_3708 0.31 +0.9
3,915,103 + HP15_3708 0.32 -0.1
3,915,114 + HP15_3708 0.33 -0.7
3,915,170 - HP15_3708 0.37 +0.2
3,915,229 - HP15_3708 0.42 -0.4
3,915,253 - HP15_3708 0.44 +1.1
3,915,339 + HP15_3708 0.51 +0.5
3,915,347 - HP15_3708 0.51 +0.3
3,915,377 + HP15_3708 0.54 +0.1
3,915,377 + HP15_3708 0.54 +1.1
3,915,385 - HP15_3708 0.54 -0.2
3,915,527 - HP15_3708 0.65 +0.8
3,915,690 + HP15_3708 0.78 +1.7
3,915,730 + HP15_3708 0.81 +1.3
3,915,820 + HP15_3708 0.88 -0.8
3,915,866 + -0.8
3,915,871 + +0.0
3,915,930 + -0.5
3,915,986 + +0.2
3,915,988 + -0.3
3,916,093 - -1.3
3,916,120 + -0.6
3,916,164 - +0.0
3,916,297 - HP15_3709 0.14 -0.7
3,916,320 - HP15_3709 0.16 +1.2
3,916,327 + HP15_3709 0.16 +1.7
3,916,359 + HP15_3709 0.18 +0.3
3,916,378 + HP15_3709 0.19 +0.1
3,916,378 + HP15_3709 0.19 +1.2
3,916,536 - HP15_3709 0.28 -1.0
3,916,577 + HP15_3709 0.31 -0.6
3,916,622 - HP15_3709 0.34 +0.1
3,916,697 + HP15_3709 0.38 -0.3
3,916,712 + HP15_3709 0.39 +0.8
3,916,749 + HP15_3709 0.41 -0.3
3,916,799 - HP15_3709 0.44 -0.3
3,916,856 + HP15_3709 0.48 +0.2
3,916,856 + HP15_3709 0.48 -0.1
3,916,866 + HP15_3709 0.48 +0.8
3,916,965 - HP15_3709 0.54 +0.7

Or see this region's nucleotide sequence