Strain Fitness in Marinobacter adhaerens HP15 around HP15_3045

Experiment: L-Phenylalanine as (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_3044 and HP15_3045 are separated by 331 nucleotidesHP15_3045 and HP15_3046 are separated by 10 nucleotides HP15_3044: HP15_3044 - conserved hypothetical protein, secreted, at 3,191,901 to 3,193,034 _3044 HP15_3045: HP15_3045 - pyruvate dehydrogenase complex, E2 component, dihydrolipoamide acetyltransferase, at 3,193,366 to 3,195,030 _3045 HP15_3046: HP15_3046 - pyruvate dehydrogenase subunit E1, at 3,195,041 to 3,197,704 _3046 Position (kb) 3193 3194 3195 3196Strain fitness (log2 ratio) -2 -1 0 1 2at 3192.469 kb on + strand, within HP15_3044at 3192.470 kb on - strand, within HP15_3044at 3192.477 kb on - strand, within HP15_3044at 3192.477 kb on - strand, within HP15_3044at 3192.477 kb on - strand, within HP15_3044at 3192.478 kb on - strand, within HP15_3044at 3192.518 kb on + strand, within HP15_3044at 3192.605 kb on - strand, within HP15_3044at 3192.661 kb on - strand, within HP15_3044at 3192.761 kb on - strand, within HP15_3044at 3192.786 kb on - strand, within HP15_3044at 3192.932 kb on - strandat 3192.961 kb on - strandat 3193.125 kb on - strandat 3193.140 kb on - strandat 3193.158 kb on + strandat 3193.244 kb on + strandat 3193.252 kb on - strandat 3193.305 kb on - strandat 3194.923 kb on + strandat 3195.266 kb on + strandat 3195.664 kb on - strand, within HP15_3046

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Phenylalanine as (N)
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3,192,469 + HP15_3044 0.50 +0.8
3,192,470 - HP15_3044 0.50 +1.0
3,192,477 - HP15_3044 0.51 +1.6
3,192,477 - HP15_3044 0.51 -0.4
3,192,477 - HP15_3044 0.51 +1.2
3,192,478 - HP15_3044 0.51 -0.4
3,192,518 + HP15_3044 0.54 -0.4
3,192,605 - HP15_3044 0.62 -0.2
3,192,661 - HP15_3044 0.67 +2.2
3,192,761 - HP15_3044 0.76 -0.5
3,192,786 - HP15_3044 0.78 +1.6
3,192,932 - -0.9
3,192,961 - +0.4
3,193,125 - -1.5
3,193,140 - +1.3
3,193,158 + +1.5
3,193,244 + +0.7
3,193,252 - +1.3
3,193,305 - -0.6
3,194,923 + -2.7
3,195,266 + -2.6
3,195,664 - HP15_3046 0.23 -0.3

Or see this region's nucleotide sequence