Strain Fitness in Marinobacter adhaerens HP15 around HP15_2576

Experiment: L-Phenylalanine as (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_2575 and HP15_2576 overlap by 10 nucleotidesHP15_2576 and HP15_2577 are separated by 114 nucleotides HP15_2575: HP15_2575 - enoyl-CoA hydratase/isomerase family protein carnitinyl-CoA, at 2,723,290 to 2,724,078 _2575 HP15_2576: HP15_2576 - acyl-CoA dehydrogenase domain protein, at 2,724,069 to 2,725,871 _2576 HP15_2577: HP15_2577 - protein containing helix-turn-helix, AraC domain, at 2,725,986 to 2,726,981 _2577 Position (kb) 2724 2725 2726Strain fitness (log2 ratio) -1 0 1 2at 2723.158 kb on - strandat 2723.191 kb on + strandat 2723.298 kb on - strandat 2723.367 kb on - strandat 2723.367 kb on - strandat 2723.386 kb on - strand, within HP15_2575at 2723.404 kb on + strand, within HP15_2575at 2723.412 kb on - strand, within HP15_2575at 2723.446 kb on + strand, within HP15_2575at 2723.454 kb on - strand, within HP15_2575at 2723.541 kb on + strand, within HP15_2575at 2723.712 kb on + strand, within HP15_2575at 2723.720 kb on - strand, within HP15_2575at 2723.720 kb on - strand, within HP15_2575at 2723.727 kb on - strand, within HP15_2575at 2723.738 kb on - strand, within HP15_2575at 2723.768 kb on - strand, within HP15_2575at 2723.840 kb on - strand, within HP15_2575at 2723.869 kb on + strand, within HP15_2575at 2723.872 kb on - strand, within HP15_2575at 2723.909 kb on + strand, within HP15_2575at 2723.917 kb on - strand, within HP15_2575at 2723.917 kb on - strand, within HP15_2575at 2723.997 kb on - strand, within HP15_2575at 2724.165 kb on + strandat 2724.238 kb on - strandat 2724.257 kb on - strand, within HP15_2576at 2724.264 kb on + strand, within HP15_2576at 2724.272 kb on - strand, within HP15_2576at 2724.274 kb on + strand, within HP15_2576at 2724.282 kb on - strand, within HP15_2576at 2724.315 kb on + strand, within HP15_2576at 2724.315 kb on + strand, within HP15_2576at 2724.526 kb on - strand, within HP15_2576at 2724.582 kb on - strand, within HP15_2576at 2724.638 kb on + strand, within HP15_2576at 2724.668 kb on + strand, within HP15_2576at 2724.704 kb on + strand, within HP15_2576at 2724.732 kb on + strand, within HP15_2576at 2724.896 kb on + strand, within HP15_2576at 2724.902 kb on - strand, within HP15_2576at 2724.925 kb on - strand, within HP15_2576at 2724.948 kb on + strand, within HP15_2576at 2725.060 kb on - strand, within HP15_2576at 2725.078 kb on + strand, within HP15_2576at 2725.142 kb on - strand, within HP15_2576at 2725.238 kb on - strand, within HP15_2576at 2725.297 kb on + strand, within HP15_2576at 2725.305 kb on - strand, within HP15_2576at 2725.305 kb on - strand, within HP15_2576at 2725.366 kb on + strand, within HP15_2576at 2725.382 kb on + strand, within HP15_2576at 2725.418 kb on - strand, within HP15_2576at 2725.512 kb on - strand, within HP15_2576at 2725.520 kb on - strand, within HP15_2576at 2725.577 kb on + strand, within HP15_2576at 2725.633 kb on + strand, within HP15_2576at 2725.708 kb on - strandat 2725.709 kb on - strandat 2725.874 kb on - strandat 2726.027 kb on - strandat 2726.032 kb on - strandat 2726.419 kb on + strand, within HP15_2577at 2726.512 kb on + strand, within HP15_2577at 2726.529 kb on - strand, within HP15_2577at 2726.534 kb on - strand, within HP15_2577at 2726.679 kb on + strand, within HP15_2577at 2726.738 kb on + strand, within HP15_2577at 2726.799 kb on + strand, within HP15_2577

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Phenylalanine as (N)
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2,723,158 - +0.2
2,723,191 + +1.1
2,723,298 - +1.7
2,723,367 - +1.3
2,723,367 - +0.1
2,723,386 - HP15_2575 0.12 +0.3
2,723,404 + HP15_2575 0.14 -0.9
2,723,412 - HP15_2575 0.15 +2.0
2,723,446 + HP15_2575 0.20 +0.1
2,723,454 - HP15_2575 0.21 +0.2
2,723,541 + HP15_2575 0.32 -1.2
2,723,712 + HP15_2575 0.53 +1.3
2,723,720 - HP15_2575 0.54 -0.5
2,723,720 - HP15_2575 0.54 +1.1
2,723,727 - HP15_2575 0.55 +1.3
2,723,738 - HP15_2575 0.57 -0.8
2,723,768 - HP15_2575 0.61 +0.4
2,723,840 - HP15_2575 0.70 -0.7
2,723,869 + HP15_2575 0.73 +1.2
2,723,872 - HP15_2575 0.74 +1.6
2,723,909 + HP15_2575 0.78 -0.3
2,723,917 - HP15_2575 0.79 +0.8
2,723,917 - HP15_2575 0.79 -0.4
2,723,997 - HP15_2575 0.90 -0.8
2,724,165 + +1.9
2,724,238 - -0.0
2,724,257 - HP15_2576 0.10 +1.0
2,724,264 + HP15_2576 0.11 +1.4
2,724,272 - HP15_2576 0.11 -0.2
2,724,274 + HP15_2576 0.11 +0.2
2,724,282 - HP15_2576 0.12 +0.6
2,724,315 + HP15_2576 0.14 -0.6
2,724,315 + HP15_2576 0.14 -0.0
2,724,526 - HP15_2576 0.25 -0.4
2,724,582 - HP15_2576 0.28 -0.3
2,724,638 + HP15_2576 0.32 +1.3
2,724,668 + HP15_2576 0.33 +1.1
2,724,704 + HP15_2576 0.35 -0.1
2,724,732 + HP15_2576 0.37 -0.3
2,724,896 + HP15_2576 0.46 -0.6
2,724,902 - HP15_2576 0.46 -0.2
2,724,925 - HP15_2576 0.47 +0.3
2,724,948 + HP15_2576 0.49 -0.9
2,725,060 - HP15_2576 0.55 -1.2
2,725,078 + HP15_2576 0.56 +0.9
2,725,142 - HP15_2576 0.60 +1.2
2,725,238 - HP15_2576 0.65 +1.2
2,725,297 + HP15_2576 0.68 +0.3
2,725,305 - HP15_2576 0.69 -0.4
2,725,305 - HP15_2576 0.69 +0.2
2,725,366 + HP15_2576 0.72 -0.1
2,725,382 + HP15_2576 0.73 +1.4
2,725,418 - HP15_2576 0.75 +1.1
2,725,512 - HP15_2576 0.80 -0.2
2,725,520 - HP15_2576 0.80 -0.0
2,725,577 + HP15_2576 0.84 +0.5
2,725,633 + HP15_2576 0.87 -0.9
2,725,708 - +0.5
2,725,709 - +0.7
2,725,874 - -0.6
2,726,027 - -1.0
2,726,032 - +0.0
2,726,419 + HP15_2577 0.43 -1.3
2,726,512 + HP15_2577 0.53 -0.6
2,726,529 - HP15_2577 0.55 +0.3
2,726,534 - HP15_2577 0.55 +0.4
2,726,679 + HP15_2577 0.70 +1.3
2,726,738 + HP15_2577 0.76 -0.7
2,726,799 + HP15_2577 0.82 +0.1

Or see this region's nucleotide sequence