Strain Fitness in Marinobacter adhaerens HP15 around HP15_1320

Experiment: L-Phenylalanine as (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_1319 and HP15_1320 are separated by 105 nucleotidesHP15_1320 and HP15_1321 are separated by 210 nucleotidesHP15_1321 and HP15_tRNA22 are separated by 126 nucleotidesHP15_tRNA22 and HP15_tRNA23 are separated by 64 nucleotidesHP15_tRNA23 and HP15_tRNA24 are separated by 25 nucleotides HP15_1319: HP15_1319 - alanyl-tRNA synthetase, class IIc, at 1,380,978 to 1,383,608 _1319 HP15_1320: HP15_1320 - aspartate kinase: aspartate kinase, monofunctional class, at 1,383,714 to 1,384,952 _1320 HP15_1321: HP15_1321 - carbon storage regulator, at 1,385,163 to 1,385,339 _1321 HP15_tRNA22: HP15_tRNA22 - tRNA-Ser, at 1,385,466 to 1,385,555 _tRNA22 HP15_tRNA23: HP15_tRNA23 - tRNA-Arg, at 1,385,620 to 1,385,696 _tRNA23 HP15_tRNA24: HP15_tRNA24 - tRNA-Arg, at 1,385,722 to 1,385,798 _tRNA24 Position (kb) 1383 1384 1385Strain fitness (log2 ratio) -1 0 1at 1385.119 kb on + strandat 1385.308 kb on + strand, within HP15_1321at 1385.850 kb on + strandat 1385.908 kb on + strandat 1385.919 kb on + strandat 1385.948 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Phenylalanine as (N)
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1,385,119 + +0.5
1,385,308 + HP15_1321 0.82 -0.6
1,385,850 + +0.3
1,385,908 + -0.6
1,385,919 + -0.1
1,385,948 - -0.5

Or see this region's nucleotide sequence