Strain Fitness in Shewanella amazonensis SB2B around Sama_2078

Experiment: D,L-Lactate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D,L-Lactate
2,515,799	-		Sama_2077	0.39	-1.7
2,515,799	-		Sama_2077	0.39	-0.1
2,515,799	-		Sama_2077	0.39	+0.6
2,515,799	-		Sama_2077	0.39	+0.3
2,515,799	-		Sama_2077	0.39	+0.0
2,515,831	+		Sama_2077	0.41	-0.9
2,515,832	-		Sama_2077	0.41	-0.3
2,515,832	-		Sama_2077	0.41	+1.8
2,515,832	-		Sama_2077	0.41	+0.6
2,515,868	+		Sama_2077	0.44	+0.1
2,515,957	+		Sama_2077	0.51	+1.1
2,515,965	+		Sama_2077	0.52	+1.0
2,515,965	+		Sama_2077	0.52	-2.7
2,515,966	-		Sama_2077	0.52	+2.5
2,515,966	-		Sama_2077	0.52	+0.1
2,515,966	-		Sama_2077	0.52	+1.3
2,516,053	-		Sama_2077	0.58	+0.8
2,516,072	+		Sama_2077	0.60	+0.5
2,516,090	+		Sama_2077	0.61	+0.5
2,516,169	+		Sama_2077	0.67	+0.1
2,516,170	-		Sama_2077	0.67	+0.6
2,516,170	-		Sama_2077	0.67	-0.1
2,516,170	-		Sama_2077	0.67	-0.0
2,516,195	+		Sama_2077	0.69	+0.3
2,516,196	-		Sama_2077	0.69	-2.1
2,516,235	+		Sama_2077	0.72	+0.1
2,516,240	+		Sama_2077	0.73	+0.3
2,516,240	+		Sama_2077	0.73	+0.6
2,516,240	+		Sama_2077	0.73	-0.1
2,516,241	-		Sama_2077	0.73	-1.1
2,516,245	-		Sama_2077	0.73	+0.3
2,516,245	-		Sama_2077	0.73	+2.4
2,516,266	-		Sama_2077	0.75	+0.9
2,516,297	+		Sama_2077	0.77	-0.7
2,516,297	+		Sama_2077	0.77	-0.7
2,516,297	+		Sama_2077	0.77	+0.2
2,516,297	+		Sama_2077	0.77	+0.1
2,516,298	-		Sama_2077	0.77	+0.7
2,516,413	-		Sama_2077	0.86	+0.9
2,516,436	+		Sama_2077	0.88	+1.3
2,516,436	+		Sama_2077	0.88	+1.0
2,516,436	+		Sama_2077	0.88	+0.9
2,516,437	-		Sama_2077	0.88	-0.7
2,516,437	-		Sama_2077	0.88	+0.1
2,516,437	-		Sama_2077	0.88	-1.7
2,516,437	-		Sama_2077	0.88	-0.4
2,516,437	-		Sama_2077	0.88	-0.1
2,516,438	+		Sama_2077	0.88	-2.1
2,516,535	-				+0.3
2,516,564	+				-1.1
2,516,564	+				-0.7
2,516,564	+				+0.5
2,516,564	+				+0.6
2,516,567	+				-0.3
2,516,568	-				-0.1
2,516,568	-				+1.6
2,516,568	-				-0.7
2,516,635	+				+0.9
2,516,635	+				-0.5
2,516,681	-				+2.6
2,516,718	-				+0.1
2,516,756	-				+1.6
2,516,756	-				-0.7
2,516,798	+				-3.0
2,516,814	-				-0.7
2,516,814	-				-2.3
2,516,814	-				-3.7
2,516,814	-				-3.5
2,516,815	+				-2.3
2,516,815	+				-0.7
2,516,815	+				-1.7
2,516,815	+				-0.7
2,516,816	-				-1.7
2,516,816	-				-0.7
2,516,816	-				-3.0
2,516,816	-				-1.3
2,516,816	-				-2.9
2,516,816	-				-3.0
2,516,835	+				-2.7
2,516,835	+				-2.3
2,516,928	+				-0.1
2,516,928	+				-1.7
2,516,928	+				-3.5
2,516,929	-				-2.7
2,516,929	-				-0.7
2,516,929	-				-1.5
2,516,929	-				-3.3
2,516,929	-				-1.7
2,516,970	+				-0.7
2,516,971	-				-1.5
2,516,971	-				-2.3
2,516,971	-				-1.7
2,516,971	-				-1.3
2,516,971	-				-0.7
2,516,971	-				-2.9
2,516,971	-				-4.4
2,516,971	-				-0.7
2,516,971	-				-0.7
2,516,971	-				-1.7
2,516,971	-				-4.7
2,517,084	-				-3.7
2,517,084	-				-3.0
2,517,084	-				-2.3
2,517,176	+		Sama_2078	0.12	-2.3
2,517,194	+		Sama_2078	0.13	-2.1
2,517,195	-		Sama_2078	0.13	-3.5
2,517,259	-		Sama_2078	0.15	-3.3
2,517,259	-		Sama_2078	0.15	-1.7
2,517,330	-		Sama_2078	0.17	-1.7
2,517,367	-		Sama_2078	0.18	-3.1
2,517,367	-		Sama_2078	0.18	-0.7
2,517,367	-		Sama_2078	0.18	-0.7
2,517,451	+		Sama_2078	0.20	-1.7
2,517,452	-		Sama_2078	0.20	-2.0
2,517,659	+		Sama_2078	0.26	-2.7
2,517,659	+		Sama_2078	0.26	-3.1
2,517,660	-		Sama_2078	0.26	-2.1
2,517,751	+		Sama_2078	0.29	-0.7
2,517,770	+		Sama_2078	0.30	-2.7
2,517,771	-		Sama_2078	0.30	-1.4
2,517,771	-		Sama_2078	0.30	-2.5
2,517,884	+		Sama_2078	0.33	-2.3
2,517,904	+		Sama_2078	0.34	-0.7
2,517,905	-		Sama_2078	0.34	-2.4
2,517,905	-		Sama_2078	0.34	-1.3
2,517,905	-		Sama_2078	0.34	-1.7
2,517,980	+		Sama_2078	0.36	-3.7
2,518,083	-		Sama_2078	0.39	-0.7
2,518,094	+		Sama_2078	0.39	-3.1
2,518,095	-		Sama_2078	0.39	-1.7
2,518,114	-		Sama_2078	0.40	-3.7
2,518,170	-		Sama_2078	0.41	-1.7
2,518,220	-		Sama_2078	0.43	-2.7
2,518,288	+		Sama_2078	0.45	-2.7
2,518,289	-		Sama_2078	0.45	-1.7
2,518,289	-		Sama_2078	0.45	-0.7
2,518,289	-		Sama_2078	0.45	-3.0
2,518,289	-		Sama_2078	0.45	-0.7
2,518,311	+		Sama_2078	0.45	-3.7
2,518,312	-		Sama_2078	0.45	-1.7
2,518,312	-		Sama_2078	0.45	-2.5
2,518,619	+		Sama_2078	0.54	-3.0
2,518,631	+		Sama_2078	0.55	-0.7
2,518,655	+		Sama_2078	0.55	-3.3
2,518,711	+		Sama_2078	0.57	-2.0
2,518,711	+		Sama_2078	0.57	-1.0
2,518,711	+		Sama_2078	0.57	-2.0
2,518,711	+		Sama_2078	0.57	-1.7
2,518,712	-		Sama_2078	0.57	-2.3
2,518,712	-		Sama_2078	0.57	-1.3
2,518,712	-		Sama_2078	0.57	-1.7
2,518,712	-		Sama_2078	0.57	-2.7
2,518,712	-		Sama_2078	0.57	-0.7
2,518,767	-		Sama_2078	0.59	-4.1
2,518,767	-		Sama_2078	0.59	-2.7
2,518,768	+		Sama_2078	0.59	-1.3
2,518,769	-		Sama_2078	0.59	-3.5
2,518,769	-		Sama_2078	0.59	-3.0
2,518,769	-		Sama_2078	0.59	-3.3
2,518,769	-		Sama_2078	0.59	-1.7
2,518,769	-		Sama_2078	0.59	-2.3
2,518,993	+		Sama_2078	0.65	-2.3
2,519,008	+		Sama_2078	0.66	-2.3
2,519,008	+		Sama_2078	0.66	-1.7
2,519,008	+		Sama_2078	0.66	-2.3
2,519,009	-		Sama_2078	0.66	-0.5
2,519,009	-		Sama_2078	0.66	-1.5
2,519,009	-		Sama_2078	0.66	-0.7
2,519,009	-		Sama_2078	0.66	-2.1
2,519,014	-		Sama_2078	0.66	-1.4
2,519,014	-		Sama_2078	0.66	-1.7
2,519,014	-		Sama_2078	0.66	-2.3
2,519,014	-		Sama_2078	0.66	-2.5
2,519,132	+		Sama_2078	0.69	-2.3
2,519,132	+		Sama_2078	0.69	-2.3
2,519,133	-		Sama_2078	0.69	-3.0
2,519,136	+		Sama_2078	0.70	-2.3
2,519,136	+		Sama_2078	0.70	-2.7
2,519,136	+		Sama_2078	0.70	-1.7
2,519,137	-		Sama_2078	0.70	-0.7
2,519,137	-		Sama_2078	0.70	-0.7
2,519,137	-		Sama_2078	0.70	-1.7
2,519,137	-		Sama_2078	0.70	-1.7
2,519,137	-		Sama_2078	0.70	-0.7
2,519,137	-		Sama_2078	0.70	-1.7
2,519,190	+		Sama_2078	0.71	-1.7
2,519,190	+		Sama_2078	0.71	-0.7
2,519,190	+		Sama_2078	0.71	-1.7
2,519,191	-		Sama_2078	0.71	-0.7
2,519,191	-		Sama_2078	0.71	-3.3
2,519,191	-		Sama_2078	0.71	-3.0
2,519,257	+		Sama_2078	0.73	-0.7
2,519,258	-		Sama_2078	0.73	-2.8
2,519,258	-		Sama_2078	0.73	-1.7
2,519,258	-		Sama_2078	0.73	-3.3
2,519,258	-		Sama_2078	0.73	-2.7
2,519,258	-		Sama_2078	0.73	-0.3
2,519,258	-		Sama_2078	0.73	-2.0
2,519,340	-		Sama_2078	0.75	-2.3
2,519,342	-		Sama_2078	0.76	+0.3
2,519,342	-		Sama_2078	0.76	-1.4
2,519,342	-		Sama_2078	0.76	-2.3
2,519,353	-		Sama_2078	0.76	-0.1
2,519,373	+		Sama_2078	0.76	-2.7
2,519,374	-		Sama_2078	0.76	-2.3
2,519,374	-		Sama_2078	0.76	+0.9
2,519,461	-		Sama_2078	0.79	-1.7
2,519,463	+		Sama_2078	0.79	-0.7
2,519,463	+		Sama_2078	0.79	-3.3
2,519,464	-		Sama_2078	0.79	-0.7
2,519,700	+		Sama_2078	0.86	-2.0
2,519,787	+		Sama_2078	0.89	-3.7
2,519,787	+		Sama_2078	0.89	-1.0
2,519,787	+		Sama_2078	0.89	-3.0
2,519,787	+		Sama_2078	0.89	-0.1
2,519,788	-		Sama_2078	0.89	-3.0
2,519,788	-		Sama_2078	0.89	-1.0
2,519,788	-		Sama_2078	0.89	-1.7
2,519,789	+		Sama_2078	0.89	-2.7
2,519,789	+		Sama_2078	0.89	-0.7
2,519,789	+		Sama_2078	0.89	-0.1
2,519,789	+		Sama_2078	0.89	-3.3
2,519,790	-		Sama_2078	0.89	-1.1
2,519,790	-		Sama_2078	0.89	-1.4
2,519,790	-		Sama_2078	0.89	-2.3
2,519,790	-		Sama_2078	0.89	-2.3
2,519,791	+		Sama_2078	0.89	-2.3
2,519,791	+		Sama_2078	0.89	-3.9
2,519,791	+		Sama_2078	0.89	-1.7
2,519,791	+		Sama_2078	0.89	-2.3
2,519,791	+		Sama_2078	0.89	-1.9
2,519,792	-		Sama_2078	0.89	-2.5
2,519,792	-		Sama_2078	0.89	-1.0
2,519,792	-		Sama_2078	0.89	-2.4
2,519,792	-		Sama_2078	0.89	-3.4
2,519,855	-				-1.3
2,519,868	-				-3.0
2,519,970	-				-0.1
2,520,037	+				-3.1
2,520,037	+				-1.6
2,520,037	+				-1.3
2,520,037	+				-2.4
2,520,037	+				-1.7
2,520,038	-				-3.7
2,520,038	-				-3.0
2,520,038	-				-1.7
2,520,058	+				-1.3
2,520,182	+				-0.7
2,520,182	+				+0.5
2,520,182	+				-2.0
2,520,182	+				-0.4
2,520,182	+				-1.1
2,520,183	-				+1.6
2,520,183	-				-1.7
2,520,183	-				+2.5
2,520,291	+				-2.3
2,520,292	-				+3.1
2,520,294	+				+1.9
2,520,295	-				+2.6
2,520,341	+				-0.1
2,520,376	+				+3.5
2,520,414	-				+2.3
2,520,414	-				+2.4
2,520,428	-				+2.0
2,520,428	-				+1.4
2,520,439	+				+1.5
2,520,536	-				+0.3
2,520,553	+				+2.9
2,520,554	-		Sama_2079	0.10	+1.8
2,520,554	-		Sama_2079	0.10	+2.9
2,520,554	-		Sama_2079	0.10	+4.2
2,520,555	+		Sama_2079	0.10	+2.2
2,520,743	+		Sama_2079	0.20	+2.1
2,520,743	+		Sama_2079	0.20	+2.6
2,520,769	+		Sama_2079	0.21	+0.7
2,520,769	+		Sama_2079	0.21	+3.0
2,520,769	+		Sama_2079	0.21	+4.4
2,520,769	+		Sama_2079	0.21	+3.0
2,520,769	+		Sama_2079	0.21	+2.1
2,520,770	-		Sama_2079	0.21	+0.8
2,520,770	-		Sama_2079	0.21	+2.3
2,520,770	-		Sama_2079	0.21	+3.7
2,520,770	-		Sama_2079	0.21	+0.8
2,520,770	-		Sama_2079	0.21	+2.1
2,520,770	-		Sama_2079	0.21	+1.7
2,520,770	-		Sama_2079	0.21	+1.4
2,520,770	-		Sama_2079	0.21	+4.0
2,520,770	-		Sama_2079	0.21	+2.6
2,520,771	+		Sama_2079	0.21	+1.9
2,520,771	+		Sama_2079	0.21	+1.7
2,520,772	-		Sama_2079	0.21	+1.9
2,520,821	+		Sama_2079	0.24	+1.4
2,520,821	+		Sama_2079	0.24	+1.6
2,520,821	+		Sama_2079	0.24	+3.8
2,520,821	+		Sama_2079	0.24	+2.3
2,520,822	-		Sama_2079	0.24	+1.2
2,520,822	-		Sama_2079	0.24	+3.1
2,520,822	-		Sama_2079	0.24	+2.0
2,520,999	-		Sama_2079	0.33	+1.1
2,520,999	-		Sama_2079	0.33	+1.3
2,521,009	-		Sama_2079	0.33	+1.4
2,521,145	-		Sama_2079	0.40	+0.5
2,521,146	+		Sama_2079	0.40	+1.1
2,521,146	+		Sama_2079	0.40	+2.4
2,521,147	-		Sama_2079	0.40	+2.1