Strain Fitness in Shewanella amazonensis SB2B around Sama_1501

Experiment: D,L-Lactate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D,L-Lactate
1,818,454	+		Sama_1500	0.45	-1.3
1,818,690	+		Sama_1500	0.59	+1.2
1,818,691	-		Sama_1500	0.59	-2.3
1,818,691	-		Sama_1500	0.59	-0.8
1,818,691	-		Sama_1500	0.59	-0.8
1,818,713	-		Sama_1500	0.60	+0.2
1,818,859	+		Sama_1500	0.69	+2.6
1,818,859	+		Sama_1500	0.69	+0.9
1,818,859	+		Sama_1500	0.69	-0.2
1,818,859	+		Sama_1500	0.69	-0.0
1,818,859	+		Sama_1500	0.69	-0.3
1,818,859	+		Sama_1500	0.69	-1.3
1,818,859	+		Sama_1500	0.69	+0.5
1,818,860	-		Sama_1500	0.69	+0.2
1,818,871	+		Sama_1500	0.70	+0.2
1,818,872	-		Sama_1500	0.70	-0.5
1,818,907	+		Sama_1500	0.72	-0.8
1,818,912	+		Sama_1500	0.73	+1.2
1,818,912	+		Sama_1500	0.73	+1.8
1,818,913	-		Sama_1500	0.73	-0.4
1,819,073	+		Sama_1500	0.82	+1.5
1,819,101	+		Sama_1500	0.84	+0.2
1,819,102	-		Sama_1500	0.84	-0.0
1,819,108	+		Sama_1500	0.84	+0.5
1,819,108	+		Sama_1500	0.84	-0.6
1,819,108	+		Sama_1500	0.84	-0.0
1,819,108	+		Sama_1500	0.84	-1.2
1,819,109	-		Sama_1500	0.84	+0.9
1,819,140	+		Sama_1500	0.86	+1.8
1,819,148	+		Sama_1500	0.87	+0.1
1,819,214	+				+1.2
1,819,223	+				+0.0
1,819,295	-				-0.4
1,819,295	-				-1.2
1,819,295	-				+1.6
1,819,303	+				-0.3
1,819,303	+				-0.3
1,819,361	+				-0.2
1,819,362	-				+2.1
1,819,362	-				-0.2
1,819,362	-				-0.1
1,819,470	-		Sama_1501	0.11	-0.6
1,819,575	+		Sama_1501	0.22	-0.3
1,819,575	+		Sama_1501	0.22	+0.1
1,819,611	-		Sama_1501	0.26	-0.3
1,819,611	-		Sama_1501	0.26	+0.2
1,819,620	+		Sama_1501	0.27	-3.1
1,819,631	+		Sama_1501	0.29	+0.2
1,819,637	+		Sama_1501	0.29	+1.2
1,819,706	+		Sama_1501	0.37	+0.4
1,819,707	-		Sama_1501	0.37	+0.2
1,819,714	+		Sama_1501	0.38	+2.1
1,819,715	-		Sama_1501	0.38	-0.8
1,819,749	+		Sama_1501	0.41	-0.4
1,819,750	-		Sama_1501	0.42	-0.5
1,819,866	+		Sama_1501	0.54	-0.8
1,819,866	+		Sama_1501	0.54	+0.8
1,819,867	-		Sama_1501	0.54	-0.0
1,819,923	-		Sama_1501	0.60	-0.6
1,820,004	-		Sama_1501	0.69	+0.3
1,820,016	-		Sama_1501	0.71	-1.0
1,820,066	+		Sama_1501	0.76	+0.2
1,820,179	+		Sama_1501	0.88	-0.0
1,820,179	+		Sama_1501	0.88	-0.8
1,820,179	+		Sama_1501	0.88	+1.8
1,820,180	-		Sama_1501	0.89	+0.4
1,820,277	+				+2.6
1,820,277	+				-0.4
1,820,277	+				+0.2
1,820,325	+				-1.5
1,820,325	+				-0.8
1,820,325	+				-1.8
1,820,326	-				-0.3
1,820,326	-				+0.2
1,820,328	-				-0.2
1,820,328	-				-0.4
1,820,348	-				-0.0
1,820,348	-				+0.2
1,820,423	+				-0.2
1,820,460	+				-0.4
1,820,469	+				-1.2
1,820,481	+				-1.2
1,820,516	+				-0.8
1,820,526	+				+0.8
1,820,526	+				+0.5
1,820,543	+				-0.8
1,820,543	+				-1.0
1,820,577	+				-0.8
1,820,577	+				-0.1
1,820,600	+				+0.2
1,820,608	+				+0.2
1,820,608	+				+1.4
1,820,609	-				+1.6
1,820,612	+				-1.4
1,820,613	-				-0.4
1,820,613	-				-1.8
1,820,714	+				-0.5
1,820,749	+				+0.8
1,820,750	-				+1.6
1,820,750	-				-0.8
1,820,911	-		Sama_1502	0.19	+0.8
1,820,926	+		Sama_1502	0.20	+0.8
1,820,926	+		Sama_1502	0.20	+0.8
1,820,926	+		Sama_1502	0.20	+0.5
1,820,926	+		Sama_1502	0.20	+1.6
1,820,926	+		Sama_1502	0.20	+0.6
1,820,926	+		Sama_1502	0.20	+0.4
1,820,926	+		Sama_1502	0.20	-1.8
1,820,926	+		Sama_1502	0.20	+1.1
1,820,927	-		Sama_1502	0.20	+1.2
1,820,927	-		Sama_1502	0.20	-0.8
1,820,928	+		Sama_1502	0.20	+0.8
1,820,928	+		Sama_1502	0.20	+1.2
1,820,928	+		Sama_1502	0.20	-1.8
1,820,929	-		Sama_1502	0.20	-0.3
1,820,929	-		Sama_1502	0.20	-0.1
1,820,929	-		Sama_1502	0.20	-0.8
1,820,929	-		Sama_1502	0.20	-1.3
1,820,929	-		Sama_1502	0.20	+0.5
1,820,946	-		Sama_1502	0.21	+1.5
1,820,980	-		Sama_1502	0.23	-0.2
1,820,988	+		Sama_1502	0.24	+0.6
1,820,988	+		Sama_1502	0.24	+0.6
1,820,989	-		Sama_1502	0.24	-0.2
1,820,989	-		Sama_1502	0.24	-0.2
1,821,038	+		Sama_1502	0.27	+0.2
1,821,038	+		Sama_1502	0.27	+0.4
1,821,038	+		Sama_1502	0.27	+0.7
1,821,038	+		Sama_1502	0.27	+1.1
1,821,038	+		Sama_1502	0.27	+2.2
1,821,038	+		Sama_1502	0.27	+0.8
1,821,039	-		Sama_1502	0.27	-0.8
1,821,039	-		Sama_1502	0.27	+1.1
1,821,043	-		Sama_1502	0.27	+0.6
1,821,048	+		Sama_1502	0.27	+1.1
1,821,048	+		Sama_1502	0.27	-0.4
1,821,048	+		Sama_1502	0.27	-0.0
1,821,048	+		Sama_1502	0.27	-0.8
1,821,048	+		Sama_1502	0.27	+0.9
1,821,050	+		Sama_1502	0.28	+0.5
1,821,050	+		Sama_1502	0.28	+0.6
1,821,050	+		Sama_1502	0.28	+0.1
1,821,050	+		Sama_1502	0.28	-1.2
1,821,051	-		Sama_1502	0.28	-0.1
1,821,051	-		Sama_1502	0.28	+1.6
1,821,060	+		Sama_1502	0.28	+3.1
1,821,061	-		Sama_1502	0.28	+0.2
1,821,174	+		Sama_1502	0.35	+0.0
1,821,174	+		Sama_1502	0.35	+1.1
1,821,175	-		Sama_1502	0.36	-0.3
1,821,175	-		Sama_1502	0.36	+0.8
1,821,191	+		Sama_1502	0.37	+0.4
1,821,192	-		Sama_1502	0.37	-0.2
1,821,192	-		Sama_1502	0.37	+0.2
1,821,192	-		Sama_1502	0.37	-0.5
1,821,202	+		Sama_1502	0.37	+1.8
1,821,232	+		Sama_1502	0.39	-0.6
1,821,232	+		Sama_1502	0.39	+1.3
1,821,232	+		Sama_1502	0.39	-0.8
1,821,232	+		Sama_1502	0.39	-0.2
1,821,233	-		Sama_1502	0.39	+1.2
1,821,233	-		Sama_1502	0.39	-0.2
1,821,233	-		Sama_1502	0.39	-3.3
1,821,233	-		Sama_1502	0.39	+0.6
1,821,233	-		Sama_1502	0.39	-0.2