Strain Fitness in Shewanella amazonensis SB2B around Sama_3222

Experiment: D,L-Lactate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D,L-Lactate
3,814,112	+				-0.3
3,814,112	+				+0.8
3,814,113	-				+0.7
3,814,113	-				+0.4
3,814,114	+				-1.0
3,814,114	+				+0.1
3,814,115	-				-0.5
3,814,115	-				-2.9
3,814,115	-				+0.7
3,814,115	-				+1.1
3,814,156	+				+0.3
3,814,156	+				+1.0
3,814,157	-				-0.8
3,814,157	-				+0.7
3,814,157	-				-1.3
3,814,157	-				-1.9
3,814,157	-				-1.9
3,814,163	+				-0.3
3,814,163	+				+0.5
3,814,164	-				-1.3
3,814,164	-				-0.3
3,814,209	+				+0.3
3,814,209	+				+0.4
3,814,209	+				+0.1
3,814,210	-				+0.3
3,814,219	+				+1.2
3,814,220	-				+1.3
3,814,228	+				+0.7
3,814,228	+				-0.0
3,814,253	+				-0.7
3,814,253	+				+0.8
3,814,253	+				+0.3
3,814,253	+				-0.3
3,814,253	+				+2.1
3,814,254	-				+0.1
3,814,254	-				+0.1
3,814,295	+		Sama_3221	0.13	-1.1
3,814,295	+		Sama_3221	0.13	+0.8
3,814,295	+		Sama_3221	0.13	+0.4
3,814,295	+		Sama_3221	0.13	+0.2
3,814,296	-		Sama_3221	0.13	+0.5
3,814,398	+		Sama_3221	0.28	+0.3
3,814,399	-		Sama_3221	0.28	+0.3
3,814,399	-		Sama_3221	0.28	+0.5
3,814,407	+		Sama_3221	0.29	+0.3
3,814,407	+		Sama_3221	0.29	-1.9
3,814,408	-		Sama_3221	0.30	+1.2
3,814,413	+		Sama_3221	0.30	+0.1
3,814,413	+		Sama_3221	0.30	-1.9
3,814,414	-		Sama_3221	0.31	+0.2
3,814,414	-		Sama_3221	0.31	-1.3
3,814,451	+		Sama_3221	0.36	+0.5
3,814,451	+		Sama_3221	0.36	+0.1
3,814,451	+		Sama_3221	0.36	-0.5
3,814,452	-		Sama_3221	0.36	+1.1
3,814,452	-		Sama_3221	0.36	+0.7
3,814,452	-		Sama_3221	0.36	+0.1
3,814,452	-		Sama_3221	0.36	+0.7
3,814,452	-		Sama_3221	0.36	+1.3
3,814,502	+		Sama_3221	0.44	+0.3
3,814,502	+		Sama_3221	0.44	+1.1
3,814,502	+		Sama_3221	0.44	+0.6
3,814,502	+		Sama_3221	0.44	-0.3
3,814,502	+		Sama_3221	0.44	-0.0
3,814,502	+		Sama_3221	0.44	-0.9
3,814,502	+		Sama_3221	0.44	+0.1
3,814,502	+		Sama_3221	0.44	+1.0
3,814,502	+		Sama_3221	0.44	+0.6
3,814,502	+		Sama_3221	0.44	-0.3
3,814,503	-		Sama_3221	0.44	-0.7
3,814,503	-		Sama_3221	0.44	+0.1
3,814,503	-		Sama_3221	0.44	+2.2
3,814,546	+		Sama_3221	0.50	-0.3
3,814,547	-		Sama_3221	0.50	+1.6
3,814,615	+		Sama_3221	0.60	+0.1
3,814,615	+		Sama_3221	0.60	-0.3
3,814,615	+		Sama_3221	0.60	+0.9
3,814,615	+		Sama_3221	0.60	+0.7
3,814,616	-		Sama_3221	0.60	+2.0
3,814,616	-		Sama_3221	0.60	+4.0
3,814,616	-		Sama_3221	0.60	-0.0
3,814,616	-		Sama_3221	0.60	-0.3
3,814,616	-		Sama_3221	0.60	-0.3
3,814,616	-		Sama_3221	0.60	-0.6
3,814,616	-		Sama_3221	0.60	-0.3
3,814,661	+		Sama_3221	0.67	-0.0
3,814,661	+		Sama_3221	0.67	+0.7
3,814,661	+		Sama_3221	0.67	+0.1
3,814,661	+		Sama_3221	0.67	+0.7
3,814,661	+		Sama_3221	0.67	+0.2
3,814,661	+		Sama_3221	0.67	+1.3
3,814,661	+		Sama_3221	0.67	-0.5
3,814,661	+		Sama_3221	0.67	+0.1
3,814,661	+		Sama_3221	0.67	-0.3
3,814,661	+		Sama_3221	0.67	+0.7
3,814,661	+		Sama_3221	0.67	-0.5
3,814,661	+		Sama_3221	0.67	+1.0
3,814,661	+		Sama_3221	0.67	+1.5
3,814,661	+		Sama_3221	0.67	+1.4
3,814,662	-		Sama_3221	0.67	+0.7
3,814,662	-		Sama_3221	0.67	-0.3
3,814,662	-		Sama_3221	0.67	+0.5
3,814,662	-		Sama_3221	0.67	+0.7
3,814,662	-		Sama_3221	0.67	+0.4
3,814,662	-		Sama_3221	0.67	-0.6
3,814,662	-		Sama_3221	0.67	-0.3
3,814,662	-		Sama_3221	0.67	+0.2
3,814,662	-		Sama_3221	0.67	-0.0
3,814,662	-		Sama_3221	0.67	+1.2
3,814,662	-		Sama_3221	0.67	+0.6
3,814,662	-		Sama_3221	0.67	-0.3
3,814,662	-		Sama_3221	0.67	-1.1
3,814,662	-		Sama_3221	0.67	+0.8
3,814,668	-		Sama_3221	0.68	+1.2
3,814,709	+		Sama_3221	0.74	+0.2
3,814,709	+		Sama_3221	0.74	+0.2
3,814,726	+		Sama_3221	0.77	+1.0
3,814,726	+		Sama_3221	0.77	-0.0
3,814,726	+		Sama_3221	0.77	-0.4
3,814,727	-		Sama_3221	0.77	+1.1
3,814,812	-		Sama_3221	0.89	-0.9
3,814,862	+				+0.5
3,814,862	+				+0.6
3,814,862	+				-0.3
3,814,863	-				+1.5
3,814,863	-				-0.0
3,814,863	-				+1.5
3,814,863	-				+0.7
3,814,863	-				+0.5
3,814,863	-				+0.4
3,814,863	-				+1.0
3,814,903	+				+1.0
3,814,903	+				-0.1
3,814,950	+				+0.6
3,814,950	+				+0.3
3,814,950	+				+0.5
3,814,951	-				+0.1
3,814,982	+				+1.1
3,814,994	+				+0.3
3,815,021	+				+0.1
3,815,022	-				+0.5
3,815,022	-				-0.3
3,815,089	-				+0.4
3,815,103	+				-0.7
3,815,103	+				-1.0
3,815,103	+				-0.6
3,815,103	+				+1.2
3,815,103	+				+0.2
3,815,103	+				+1.5
3,815,103	+				+0.5
3,815,103	+				-0.3
3,815,103	+				-0.3
3,815,103	+				+1.4
3,815,103	+				+0.7
3,815,103	+				+0.6
3,815,103	+				+0.5
3,815,103	+				+0.5
3,815,103	+				+0.7
3,815,103	+				+0.3
3,815,103	+				+0.7
3,815,103	+				+0.1
3,815,103	+				+1.7
3,815,103	+				-0.8
3,815,103	+				-1.3
3,815,103	+				+1.7
3,815,103	+				+1.9
3,815,103	+				+0.1
3,815,103	+				+0.4
3,815,103	+				+2.9
3,815,103	+				+0.9
3,815,104	-				+0.3
3,815,104	-				+0.3
3,815,104	-				-0.9
3,815,104	-				-1.0
3,815,104	-				-0.5
3,815,104	-				-1.5
3,815,104	-				+1.1
3,815,104	-				-0.3
3,815,104	-				+0.4
3,815,104	-				+1.9
3,815,104	-				-0.3
3,815,104	-				+0.6
3,815,104	-				+0.5
3,815,104	-				-0.6
3,815,104	-				+0.1
3,815,104	-				+0.4
3,815,104	-				+0.3
3,815,104	-				+0.9
3,815,104	-				+0.2
3,815,104	-				-0.4
3,815,104	-				-0.8
3,815,104	-				-2.3
3,815,104	-				-0.3
3,815,105	+				+0.7
3,815,105	+				-0.0
3,815,105	+				+0.1
3,815,105	+				-0.9
3,815,105	+				+0.3
3,815,105	+				+0.9
3,815,105	+				+1.0
3,815,105	+				+2.1
3,815,105	+				-1.6
3,815,105	+				-0.3
3,815,105	+				+0.7
3,815,105	+				-1.3
3,815,105	+				+0.2
3,815,105	+				+1.5
3,815,105	+				+0.7
3,815,105	+				+2.2
3,815,105	+				-1.3
3,815,105	+				+0.2
3,815,105	+				+0.8
3,815,106	-				-0.3
3,815,106	-				-2.3
3,815,106	-				+0.7
3,815,106	-				-0.7
3,815,106	-				+1.3
3,815,106	-				+0.1
3,815,106	-				-1.5
3,815,106	-				+0.1
3,815,106	-				-0.3
3,815,106	-				+1.1
3,815,106	-				-1.3
3,815,106	-				+0.7
3,815,106	-				+2.1
3,815,106	-				-0.3
3,815,141	+		Sama_3222	0.13	+0.7
3,815,148	+		Sama_3222	0.14	+2.1
3,815,148	+		Sama_3222	0.14	+1.5
3,815,148	+		Sama_3222	0.14	+0.7
3,815,149	-		Sama_3222	0.14	+2.3
3,815,216	+		Sama_3222	0.23	+0.7
3,815,217	-		Sama_3222	0.23	-0.3
3,815,264	+		Sama_3222	0.30	+1.0
3,815,265	-		Sama_3222	0.30	-0.5
3,815,265	-		Sama_3222	0.30	+0.7
3,815,265	-		Sama_3222	0.30	+1.1
3,815,265	-		Sama_3222	0.30	-0.0
3,815,283	+		Sama_3222	0.32	-0.4
3,815,283	+		Sama_3222	0.32	+0.6
3,815,284	-		Sama_3222	0.32	-1.3
3,815,329	-		Sama_3222	0.39	+1.9
3,815,329	-		Sama_3222	0.39	+0.6
3,815,329	-		Sama_3222	0.39	+1.1
3,815,340	+		Sama_3222	0.40	-0.1
3,815,340	+		Sama_3222	0.40	+0.1
3,815,341	-		Sama_3222	0.40	-0.2
3,815,341	-		Sama_3222	0.40	+0.8
3,815,341	-		Sama_3222	0.40	+0.1
3,815,341	-		Sama_3222	0.40	+0.7
3,815,344	+		Sama_3222	0.41	+1.0
3,815,344	+		Sama_3222	0.41	+1.1
3,815,344	+		Sama_3222	0.41	-0.1
3,815,344	+		Sama_3222	0.41	+0.7
3,815,345	-		Sama_3222	0.41	+1.0
3,815,345	-		Sama_3222	0.41	+0.5
3,815,345	-		Sama_3222	0.41	+1.5
3,815,518	+		Sama_3222	0.64	+1.0
3,815,519	-		Sama_3222	0.64	+0.7
3,815,606	+		Sama_3222	0.76	+0.5
3,815,607	-		Sama_3222	0.77	+0.3
3,815,607	-		Sama_3222	0.77	+0.4
3,815,607	-		Sama_3222	0.77	+0.7
3,815,607	-		Sama_3222	0.77	-0.4
3,815,607	-		Sama_3222	0.77	-1.3
3,815,607	-		Sama_3222	0.77	-1.3
3,815,649	+		Sama_3222	0.82	+2.1
3,815,650	-		Sama_3222	0.82	+0.7
3,815,650	-		Sama_3222	0.82	+1.1
3,815,650	-		Sama_3222	0.82	+0.1
3,815,650	-		Sama_3222	0.82	+0.7
3,815,650	-		Sama_3222	0.82	+0.6
3,815,650	-		Sama_3222	0.82	+0.7
3,815,743	+				-0.1
3,815,743	+				+0.6
3,815,744	-				-0.4
3,815,744	-				+1.3
3,815,744	-				-0.1
3,815,744	-				+0.5
3,815,744	-				-1.1
3,815,748	+				-1.9
3,815,748	+				+0.2
3,815,748	+				-0.6
3,815,748	+				+2.1
3,815,748	+				-1.3
3,815,748	+				+1.1
3,815,748	+				-0.6
3,815,748	+				-0.9
3,815,748	+				+1.5
3,815,748	+				-1.3
3,815,748	+				-0.1
3,815,748	+				-0.5
3,815,748	+				+1.3
3,815,748	+				+0.5
3,815,749	-				+0.3
3,815,749	-				-1.4
3,815,749	-				-0.3
3,815,749	-				+1.1
3,815,749	-				+0.4
3,815,749	-				-0.3
3,815,831	+				+0.0
3,815,832	-				-0.5
3,815,832	-				+0.7
3,815,841	-				-0.1
3,815,841	-				-1.9
3,815,902	+				+0.9
3,815,903	-				+1.1
3,815,933	-				+1.7
3,815,933	-				-0.3
3,815,979	-				-0.3
3,816,080	+				+0.5
3,816,080	+				+0.4
3,816,084	+				-0.0
3,816,084	+				+0.2
3,816,084	+				+0.7
3,816,084	+				+1.7
3,816,084	+				-0.0
3,816,084	+				+0.5
3,816,084	+				-0.9
3,816,085	-				-1.3
3,816,085	-				-0.9
3,816,085	-				-0.1
3,816,085	-				+0.9
3,816,085	-				+2.3
3,816,088	-				+1.5
3,816,104	+				-1.3
3,816,105	-				+0.7
3,816,105	-				+0.1
3,816,105	-				+1.0
3,816,105	-				+1.3
3,816,143	+				+0.1
3,816,143	+				+1.0
3,816,144	-				-0.3
3,816,267	+		Sama_3223	0.11	+0.2
3,816,268	-		Sama_3223	0.11	-0.3
3,816,268	-		Sama_3223	0.11	+0.1
3,816,276	+		Sama_3223	0.11	+2.7
3,816,276	+		Sama_3223	0.11	-1.0
3,816,277	-		Sama_3223	0.11	+0.2
3,816,277	-		Sama_3223	0.11	-0.0
3,816,322	+		Sama_3223	0.14	+0.8
3,816,322	+		Sama_3223	0.14	+0.6
3,816,323	-		Sama_3223	0.15	-0.3
3,816,323	-		Sama_3223	0.15	+0.1
3,816,323	-		Sama_3223	0.15	+1.7
3,816,323	-		Sama_3223	0.15	-1.3
3,816,342	+		Sama_3223	0.16	-1.0
3,816,364	+		Sama_3223	0.17	+0.1
3,816,365	-		Sama_3223	0.18	+0.6
3,816,365	-		Sama_3223	0.18	-0.5
3,816,608	+		Sama_3223	0.35	+0.6
3,816,608	+		Sama_3223	0.35	+2.9
3,816,608	+		Sama_3223	0.35	+1.0
3,816,608	+		Sama_3223	0.35	-0.6
3,816,608	+		Sama_3223	0.35	+0.7
3,816,608	+		Sama_3223	0.35	+0.2
3,816,608	+		Sama_3223	0.35	+1.1
3,816,608	+		Sama_3223	0.35	+0.2
3,816,608	+		Sama_3223	0.35	+1.7
3,816,609	-		Sama_3223	0.35	-0.6
3,816,609	-		Sama_3223	0.35	+0.5
3,816,609	-		Sama_3223	0.35	+0.2
3,816,609	-		Sama_3223	0.35	+1.7
3,816,609	-		Sama_3223	0.35	+0.3
3,816,609	-		Sama_3223	0.35	+3.3
3,816,609	-		Sama_3223	0.35	-0.3
3,816,609	-		Sama_3223	0.35	+0.2
3,816,662	-		Sama_3223	0.39	+1.7
3,816,670	+		Sama_3223	0.39	-0.7
3,816,670	+		Sama_3223	0.39	+0.1
3,816,671	-		Sama_3223	0.39	+0.1
3,816,703	+		Sama_3223	0.41	+1.5
3,816,704	-		Sama_3223	0.42	-0.5
3,816,704	-		Sama_3223	0.42	+2.0
3,816,704	-		Sama_3223	0.42	-0.0
3,816,704	-		Sama_3223	0.42	-0.0
3,816,752	+		Sama_3223	0.45	+0.0
3,816,752	+		Sama_3223	0.45	+0.5
3,816,753	-		Sama_3223	0.45	+0.2
3,816,753	-		Sama_3223	0.45	-0.9
3,816,753	-		Sama_3223	0.45	+0.1
3,816,753	-		Sama_3223	0.45	+0.2
3,816,757	+		Sama_3223	0.45	-1.9
3,816,757	+		Sama_3223	0.45	+0.7
3,816,757	+		Sama_3223	0.45	+0.4
3,816,757	+		Sama_3223	0.45	-0.2
3,816,758	-		Sama_3223	0.45	-0.6
3,816,758	-		Sama_3223	0.45	+0.1
3,816,758	-		Sama_3223	0.45	+0.9