Strain Fitness in Marinobacter adhaerens HP15 around HP15_2163

Experiment: L-Leucine as (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_2161 and HP15_2162 are separated by 7 nucleotidesHP15_2162 and HP15_2163 overlap by 1 nucleotidesHP15_2163 and HP15_2164 overlap by 1 nucleotides HP15_2161: HP15_2161 - sugar ABC transporter, permease protein, at 2,267,755 to 2,268,564 _2161 HP15_2162: HP15_2162 - sugar ABC transporter, permease protein, at 2,268,572 to 2,269,438 _2162 HP15_2163: HP15_2163 - sugar ABC transporter, ATP-binding protein, at 2,269,438 to 2,270,538 _2163 HP15_2164: HP15_2164 - ATP-binding protein of sugar ABC transporter, at 2,270,538 to 2,271,632 _2164 Position (kb) 2269 2270 2271Strain fitness (log2 ratio) -1 0 1 2at 2268.438 kb on + strand, within HP15_2161at 2268.438 kb on + strand, within HP15_2161at 2268.438 kb on + strand, within HP15_2161at 2268.438 kb on + strand, within HP15_2161at 2268.446 kb on - strand, within HP15_2161at 2268.446 kb on - strand, within HP15_2161at 2268.751 kb on + strand, within HP15_2162at 2268.819 kb on + strand, within HP15_2162at 2268.916 kb on + strand, within HP15_2162at 2268.916 kb on + strand, within HP15_2162at 2268.921 kb on + strand, within HP15_2162at 2268.929 kb on - strand, within HP15_2162at 2269.010 kb on + strand, within HP15_2162at 2269.018 kb on - strand, within HP15_2162at 2269.177 kb on - strand, within HP15_2162at 2269.182 kb on + strand, within HP15_2162at 2269.276 kb on + strand, within HP15_2162at 2269.280 kb on + strand, within HP15_2162at 2269.312 kb on - strand, within HP15_2162at 2269.421 kb on + strandat 2269.467 kb on - strandat 2269.516 kb on - strandat 2269.573 kb on - strand, within HP15_2163at 2269.612 kb on + strand, within HP15_2163at 2269.846 kb on - strand, within HP15_2163at 2269.856 kb on - strand, within HP15_2163at 2269.902 kb on + strand, within HP15_2163at 2269.928 kb on + strand, within HP15_2163at 2269.929 kb on - strand, within HP15_2163at 2270.012 kb on - strand, within HP15_2163at 2270.041 kb on - strand, within HP15_2163at 2270.064 kb on + strand, within HP15_2163at 2270.366 kb on - strand, within HP15_2163at 2270.404 kb on + strand, within HP15_2163at 2270.412 kb on - strand, within HP15_2163at 2270.490 kb on + strandat 2270.649 kb on + strand, within HP15_2164at 2270.722 kb on + strand, within HP15_2164at 2270.736 kb on + strand, within HP15_2164at 2270.955 kb on + strand, within HP15_2164at 2271.072 kb on + strand, within HP15_2164at 2271.074 kb on + strand, within HP15_2164at 2271.082 kb on - strand, within HP15_2164at 2271.084 kb on - strand, within HP15_2164at 2271.115 kb on + strand, within HP15_2164at 2271.201 kb on + strand, within HP15_2164at 2271.209 kb on - strand, within HP15_2164at 2271.216 kb on - strand, within HP15_2164at 2271.218 kb on + strand, within HP15_2164at 2271.234 kb on - strand, within HP15_2164at 2271.260 kb on - strand, within HP15_2164at 2271.362 kb on + strand, within HP15_2164at 2271.484 kb on - strand, within HP15_2164at 2271.484 kb on - strand, within HP15_2164at 2271.521 kb on + strand, within HP15_2164

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Leucine as (N)
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2,268,438 + HP15_2161 0.84 -1.0
2,268,438 + HP15_2161 0.84 -0.5
2,268,438 + HP15_2161 0.84 +0.3
2,268,438 + HP15_2161 0.84 +0.6
2,268,446 - HP15_2161 0.85 +0.6
2,268,446 - HP15_2161 0.85 +0.1
2,268,751 + HP15_2162 0.21 -1.4
2,268,819 + HP15_2162 0.28 +0.6
2,268,916 + HP15_2162 0.40 -1.2
2,268,916 + HP15_2162 0.40 +1.8
2,268,921 + HP15_2162 0.40 -0.3
2,268,929 - HP15_2162 0.41 -1.6
2,269,010 + HP15_2162 0.51 -0.8
2,269,018 - HP15_2162 0.51 -1.0
2,269,177 - HP15_2162 0.70 +0.8
2,269,182 + HP15_2162 0.70 +1.2
2,269,276 + HP15_2162 0.81 +0.1
2,269,280 + HP15_2162 0.82 -0.5
2,269,312 - HP15_2162 0.85 +0.8
2,269,421 + +1.3
2,269,467 - -0.6
2,269,516 - -0.6
2,269,573 - HP15_2163 0.12 +1.4
2,269,612 + HP15_2163 0.16 -1.1
2,269,846 - HP15_2163 0.37 +1.0
2,269,856 - HP15_2163 0.38 -0.6
2,269,902 + HP15_2163 0.42 -0.4
2,269,928 + HP15_2163 0.45 -0.1
2,269,929 - HP15_2163 0.45 +0.2
2,270,012 - HP15_2163 0.52 +1.2
2,270,041 - HP15_2163 0.55 -0.5
2,270,064 + HP15_2163 0.57 -0.8
2,270,366 - HP15_2163 0.84 +1.0
2,270,404 + HP15_2163 0.88 +1.3
2,270,412 - HP15_2163 0.88 -0.7
2,270,490 + -1.0
2,270,649 + HP15_2164 0.10 +0.1
2,270,722 + HP15_2164 0.17 -0.8
2,270,736 + HP15_2164 0.18 -0.3
2,270,955 + HP15_2164 0.38 -0.1
2,271,072 + HP15_2164 0.49 -0.8
2,271,074 + HP15_2164 0.49 -1.1
2,271,082 - HP15_2164 0.50 +2.5
2,271,084 - HP15_2164 0.50 +0.7
2,271,115 + HP15_2164 0.53 +0.1
2,271,201 + HP15_2164 0.61 +0.6
2,271,209 - HP15_2164 0.61 +1.2
2,271,216 - HP15_2164 0.62 +0.6
2,271,218 + HP15_2164 0.62 -1.7
2,271,234 - HP15_2164 0.64 +1.0
2,271,260 - HP15_2164 0.66 -0.2
2,271,362 + HP15_2164 0.75 -0.7
2,271,484 - HP15_2164 0.86 -0.3
2,271,484 - HP15_2164 0.86 +0.8
2,271,521 + HP15_2164 0.90 -0.3

Or see this region's nucleotide sequence