Experiment: L-Leucine as (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_149 and HP15_150 are separated by 27 nucleotides HP15_150 and HP15_151 are separated by 46 nucleotides HP15_151 and HP15_152 are separated by 7 nucleotides HP15_152 and HP15_153 are separated by 1 nucleotides
HP15_149: HP15_149 - conserved hypothetical protein, at 150,691 to 151,485
_149
HP15_150: HP15_150 - hypothetical protein, at 151,513 to 151,749
_150
HP15_151: HP15_151 - conserved hypothetical protein, membrane, at 151,796 to 152,884
_151
HP15_152: HP15_152 - conserved hypothetical protein, at 152,892 to 153,125
_152
HP15_153: HP15_153 - DSBA oxidoreductase, at 153,127 to 153,918
_153
Position (kb)
151
152
153 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 150.848 kb on - strand, within HP15_149 at 150.849 kb on - strand, within HP15_149 at 150.915 kb on + strand, within HP15_149 at 150.943 kb on + strand, within HP15_149 at 150.953 kb on - strand, within HP15_149 at 150.953 kb on - strand, within HP15_149 at 151.014 kb on + strand, within HP15_149 at 151.014 kb on + strand, within HP15_149 at 151.014 kb on + strand, within HP15_149 at 151.022 kb on - strand, within HP15_149 at 151.024 kb on + strand, within HP15_149 at 151.024 kb on + strand, within HP15_149 at 151.024 kb on + strand, within HP15_149 at 151.032 kb on - strand, within HP15_149 at 151.032 kb on - strand, within HP15_149 at 151.032 kb on - strand, within HP15_149 at 151.032 kb on - strand, within HP15_149 at 151.067 kb on - strand, within HP15_149 at 151.148 kb on + strand, within HP15_149 at 151.196 kb on + strand, within HP15_149 at 151.276 kb on + strand, within HP15_149 at 151.276 kb on + strand, within HP15_149 at 151.284 kb on - strand, within HP15_149 at 151.286 kb on + strand, within HP15_149 at 151.286 kb on + strand, within HP15_149 at 151.341 kb on + strand, within HP15_149 at 151.347 kb on + strand, within HP15_149 at 151.372 kb on + strand, within HP15_149 at 151.380 kb on - strand, within HP15_149 at 151.380 kb on - strand, within HP15_149 at 151.411 kb on + strand at 151.421 kb on + strand at 151.429 kb on - strand at 151.429 kb on - strand at 151.447 kb on + strand at 151.474 kb on + strand at 151.645 kb on + strand, within HP15_150 at 151.673 kb on - strand, within HP15_150 at 151.677 kb on + strand, within HP15_150 at 151.766 kb on + strand at 151.801 kb on - strand at 151.838 kb on - strand at 151.905 kb on - strand, within HP15_151 at 151.912 kb on + strand, within HP15_151 at 151.920 kb on - strand, within HP15_151 at 152.032 kb on + strand, within HP15_151 at 152.104 kb on - strand, within HP15_151 at 152.221 kb on + strand, within HP15_151 at 152.225 kb on + strand, within HP15_151 at 152.251 kb on + strand, within HP15_151 at 152.259 kb on - strand, within HP15_151 at 152.281 kb on - strand, within HP15_151 at 152.311 kb on + strand, within HP15_151 at 152.311 kb on + strand, within HP15_151 at 152.319 kb on - strand, within HP15_151 at 152.319 kb on - strand, within HP15_151 at 152.319 kb on - strand, within HP15_151 at 152.437 kb on + strand, within HP15_151 at 152.452 kb on + strand, within HP15_151 at 152.452 kb on + strand, within HP15_151 at 152.570 kb on + strand, within HP15_151 at 152.707 kb on + strand, within HP15_151 at 152.724 kb on + strand, within HP15_151 at 152.778 kb on - strand at 152.868 kb on - strand at 152.947 kb on - strand, within HP15_152 at 152.957 kb on - strand, within HP15_152 at 152.959 kb on + strand, within HP15_152 at 152.986 kb on - strand, within HP15_152 at 153.075 kb on - strand, within HP15_152 at 153.152 kb on - strand at 153.173 kb on - strand at 153.199 kb on - strand at 153.248 kb on - strand, within HP15_153 at 153.286 kb on + strand, within HP15_153 at 153.316 kb on - strand, within HP15_153 at 153.388 kb on - strand, within HP15_153 at 153.464 kb on + strand, within HP15_153 at 153.464 kb on + strand, within HP15_153 at 153.469 kb on + strand, within HP15_153 at 153.472 kb on - strand, within HP15_153 at 153.472 kb on - strand, within HP15_153 at 153.472 kb on - strand, within HP15_153 at 153.512 kb on + strand, within HP15_153 at 153.640 kb on + strand, within HP15_153 at 153.640 kb on + strand, within HP15_153 at 153.648 kb on - strand, within HP15_153 at 153.724 kb on + strand, within HP15_153 at 153.732 kb on - strand, within HP15_153 at 153.732 kb on - strand, within HP15_153 at 153.827 kb on + strand, within HP15_153
Per-strain Table
Position Strand Gene LocusTag Fraction L-Leucine as (N) remove 150,848 - HP15_149 0.20 +0.3 150,849 - HP15_149 0.20 +0.0 150,915 + HP15_149 0.28 -0.3 150,943 + HP15_149 0.32 -0.2 150,953 - HP15_149 0.33 +1.5 150,953 - HP15_149 0.33 +1.5 151,014 + HP15_149 0.41 +1.2 151,014 + HP15_149 0.41 -1.9 151,014 + HP15_149 0.41 +1.2 151,022 - HP15_149 0.42 -0.8 151,024 + HP15_149 0.42 -0.7 151,024 + HP15_149 0.42 +1.2 151,024 + HP15_149 0.42 +0.6 151,032 - HP15_149 0.43 -0.3 151,032 - HP15_149 0.43 +1.0 151,032 - HP15_149 0.43 -0.4 151,032 - HP15_149 0.43 +0.2 151,067 - HP15_149 0.47 +0.2 151,148 + HP15_149 0.57 +0.8 151,196 + HP15_149 0.64 -0.7 151,276 + HP15_149 0.74 +1.4 151,276 + HP15_149 0.74 -1.3 151,284 - HP15_149 0.75 -0.7 151,286 + HP15_149 0.75 -0.4 151,286 + HP15_149 0.75 -0.7 151,341 + HP15_149 0.82 +1.0 151,347 + HP15_149 0.83 +1.1 151,372 + HP15_149 0.86 -0.6 151,380 - HP15_149 0.87 +0.5 151,380 - HP15_149 0.87 -1.6 151,411 + -0.3 151,421 + +0.1 151,429 - +0.9 151,429 - +1.2 151,447 + -1.3 151,474 + +1.0 151,645 + HP15_150 0.56 -1.1 151,673 - HP15_150 0.68 -0.0 151,677 + HP15_150 0.69 -0.3 151,766 + -0.2 151,801 - +1.9 151,838 - +0.4 151,905 - HP15_151 0.10 +0.1 151,912 + HP15_151 0.11 +0.7 151,920 - HP15_151 0.11 +1.3 152,032 + HP15_151 0.22 -0.3 152,104 - HP15_151 0.28 -0.6 152,221 + HP15_151 0.39 -0.5 152,225 + HP15_151 0.39 -0.8 152,251 + HP15_151 0.42 +0.7 152,259 - HP15_151 0.43 +1.0 152,281 - HP15_151 0.45 -0.6 152,311 + HP15_151 0.47 -0.8 152,311 + HP15_151 0.47 -0.9 152,319 - HP15_151 0.48 -0.3 152,319 - HP15_151 0.48 -0.0 152,319 - HP15_151 0.48 -0.0 152,437 + HP15_151 0.59 -0.5 152,452 + HP15_151 0.60 -0.3 152,452 + HP15_151 0.60 -0.9 152,570 + HP15_151 0.71 -0.7 152,707 + HP15_151 0.84 +0.8 152,724 + HP15_151 0.85 +0.5 152,778 - -0.2 152,868 - +0.9 152,947 - HP15_152 0.24 -0.6 152,957 - HP15_152 0.28 -0.7 152,959 + HP15_152 0.29 +0.5 152,986 - HP15_152 0.40 -0.1 153,075 - HP15_152 0.78 -0.0 153,152 - +2.5 153,173 - +1.4 153,199 - -0.8 153,248 - HP15_153 0.15 +1.2 153,286 + HP15_153 0.20 -0.8 153,316 - HP15_153 0.24 +0.6 153,388 - HP15_153 0.33 +0.8 153,464 + HP15_153 0.43 +0.1 153,464 + HP15_153 0.43 +1.0 153,469 + HP15_153 0.43 -0.5 153,472 - HP15_153 0.44 +1.8 153,472 - HP15_153 0.44 +1.8 153,472 - HP15_153 0.44 -0.3 153,512 + HP15_153 0.49 -1.1 153,640 + HP15_153 0.65 +1.3 153,640 + HP15_153 0.65 +2.8 153,648 - HP15_153 0.66 -1.1 153,724 + HP15_153 0.75 +0.4 153,732 - HP15_153 0.76 +0.9 153,732 - HP15_153 0.76 +1.2 153,827 + HP15_153 0.88 +1.6
Or see this region's nucleotide sequence