Strain Fitness in Marinobacter adhaerens HP15 around HP15_1325

Experiment: L-Leucine as (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_1324 and HP15_1325 are separated by 72 nucleotidesHP15_1325 and HP15_1326 are separated by 475 nucleotides HP15_1324: HP15_1324 - metallo-beta-lactamase family protein, at 1,387,378 to 1,388,553 _1324 HP15_1325: HP15_1325 - methyl-accepting chemotaxis sensory transducer, at 1,388,626 to 1,390,566 _1325 HP15_1326: HP15_1326 - conserved hypothetical protein, at 1,391,042 to 1,392,823 _1326 Position (kb) 1388 1389 1390 1391Strain fitness (log2 ratio) -1 0 1 2at 1387.756 kb on - strand, within HP15_1324at 1387.917 kb on - strand, within HP15_1324at 1387.958 kb on + strand, within HP15_1324at 1387.995 kb on - strand, within HP15_1324at 1388.077 kb on - strand, within HP15_1324at 1388.077 kb on - strand, within HP15_1324at 1388.079 kb on + strand, within HP15_1324at 1388.122 kb on - strand, within HP15_1324at 1388.160 kb on + strand, within HP15_1324at 1388.417 kb on - strand, within HP15_1324at 1388.515 kb on - strandat 1388.517 kb on + strandat 1388.530 kb on - strandat 1388.827 kb on - strand, within HP15_1325at 1388.888 kb on - strand, within HP15_1325at 1388.888 kb on - strand, within HP15_1325at 1388.888 kb on - strand, within HP15_1325at 1388.888 kb on - strand, within HP15_1325at 1388.952 kb on - strand, within HP15_1325at 1389.000 kb on + strand, within HP15_1325at 1389.000 kb on + strand, within HP15_1325at 1389.066 kb on + strand, within HP15_1325at 1389.069 kb on + strand, within HP15_1325at 1389.132 kb on - strand, within HP15_1325at 1389.165 kb on + strand, within HP15_1325at 1389.359 kb on - strand, within HP15_1325at 1389.415 kb on - strand, within HP15_1325at 1389.503 kb on + strand, within HP15_1325at 1389.511 kb on - strand, within HP15_1325at 1389.775 kb on - strand, within HP15_1325at 1389.983 kb on - strand, within HP15_1325at 1390.115 kb on - strand, within HP15_1325at 1390.166 kb on + strand, within HP15_1325at 1390.204 kb on - strand, within HP15_1325at 1390.240 kb on - strand, within HP15_1325at 1390.635 kb on - strandat 1390.739 kb on - strandat 1390.741 kb on - strandat 1390.760 kb on - strandat 1390.853 kb on - strandat 1390.920 kb on - strandat 1391.062 kb on + strandat 1391.070 kb on - strandat 1391.096 kb on - strandat 1391.252 kb on + strand, within HP15_1326at 1391.261 kb on - strand, within HP15_1326at 1391.265 kb on + strand, within HP15_1326at 1391.294 kb on - strand, within HP15_1326at 1391.399 kb on + strand, within HP15_1326at 1391.406 kb on - strand, within HP15_1326at 1391.425 kb on + strand, within HP15_1326at 1391.425 kb on + strand, within HP15_1326at 1391.438 kb on - strand, within HP15_1326at 1391.491 kb on + strand, within HP15_1326

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Leucine as (N)
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1,387,756 - HP15_1324 0.32 -0.4
1,387,917 - HP15_1324 0.46 -0.7
1,387,958 + HP15_1324 0.49 +0.4
1,387,995 - HP15_1324 0.52 +2.3
1,388,077 - HP15_1324 0.59 +0.0
1,388,077 - HP15_1324 0.59 +0.1
1,388,079 + HP15_1324 0.60 -0.6
1,388,122 - HP15_1324 0.63 -1.0
1,388,160 + HP15_1324 0.66 +1.5
1,388,417 - HP15_1324 0.88 -0.9
1,388,515 - -0.4
1,388,517 + +1.0
1,388,530 - -0.4
1,388,827 - HP15_1325 0.10 -0.7
1,388,888 - HP15_1325 0.13 -0.2
1,388,888 - HP15_1325 0.13 +0.6
1,388,888 - HP15_1325 0.13 +0.6
1,388,888 - HP15_1325 0.13 +0.9
1,388,952 - HP15_1325 0.17 -1.6
1,389,000 + HP15_1325 0.19 +1.2
1,389,000 + HP15_1325 0.19 -0.7
1,389,066 + HP15_1325 0.23 +0.7
1,389,069 + HP15_1325 0.23 -0.3
1,389,132 - HP15_1325 0.26 -0.5
1,389,165 + HP15_1325 0.28 -0.1
1,389,359 - HP15_1325 0.38 +2.5
1,389,415 - HP15_1325 0.41 -0.6
1,389,503 + HP15_1325 0.45 +1.4
1,389,511 - HP15_1325 0.46 +0.8
1,389,775 - HP15_1325 0.59 +0.9
1,389,983 - HP15_1325 0.70 -0.6
1,390,115 - HP15_1325 0.77 +1.3
1,390,166 + HP15_1325 0.79 +1.5
1,390,204 - HP15_1325 0.81 -0.4
1,390,240 - HP15_1325 0.83 +1.3
1,390,635 - -0.7
1,390,739 - -1.3
1,390,741 - +0.3
1,390,760 - -0.4
1,390,853 - +0.6
1,390,920 - -0.1
1,391,062 + +0.4
1,391,070 - -0.2
1,391,096 - -0.2
1,391,252 + HP15_1326 0.12 +0.0
1,391,261 - HP15_1326 0.12 -0.9
1,391,265 + HP15_1326 0.13 +0.2
1,391,294 - HP15_1326 0.14 -0.2
1,391,399 + HP15_1326 0.20 +0.2
1,391,406 - HP15_1326 0.20 -0.6
1,391,425 + HP15_1326 0.21 -0.6
1,391,425 + HP15_1326 0.21 -0.4
1,391,438 - HP15_1326 0.22 +1.3
1,391,491 + HP15_1326 0.25 -0.3

Or see this region's nucleotide sequence