Strain Fitness in Shewanella amazonensis SB2B around Sama_2180

Experiment: LB, microplate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB, microplate
2,635,912	+		Sama_2178	0.68	-1.2
2,636,009	+		Sama_2178	0.76	+0.8
2,636,009	+		Sama_2178	0.76	+0.7
2,636,047	+		Sama_2178	0.78	-0.6
2,636,048	-		Sama_2178	0.78	-0.6
2,636,051	+		Sama_2178	0.79	+0.6
2,636,051	+		Sama_2178	0.79	-1.0
2,636,051	+		Sama_2178	0.79	-0.6
2,636,051	+		Sama_2178	0.79	+0.1
2,636,051	+		Sama_2178	0.79	+2.3
2,636,052	-		Sama_2178	0.79	-0.6
2,636,087	+		Sama_2178	0.81	+0.1
2,636,087	+		Sama_2178	0.81	-0.0
2,636,087	+		Sama_2178	0.81	-1.0
2,636,106	+		Sama_2178	0.83	+0.4
2,636,106	+		Sama_2178	0.83	-1.2
2,636,106	+		Sama_2178	0.83	+2.4
2,636,107	-		Sama_2178	0.83	-0.6
2,636,174	+		Sama_2178	0.88	-0.0
2,636,174	+		Sama_2178	0.88	+0.7
2,636,174	+		Sama_2178	0.88	+1.0
2,636,174	+		Sama_2178	0.88	+0.7
2,636,174	+		Sama_2178	0.88	-1.4
2,636,174	+		Sama_2178	0.88	+1.7
2,636,175	-		Sama_2178	0.88	+0.0
2,636,175	-		Sama_2178	0.88	-2.6
2,636,175	-		Sama_2178	0.88	-0.4
2,636,300	+				+0.4
2,636,300	+				-1.4
2,636,300	+				+0.8
2,636,300	+				-0.2
2,636,300	+				-0.6
2,636,301	-				-0.2
2,636,303	+				+1.0
2,636,315	+				+0.3
2,636,315	+				+0.8
2,636,315	+				-0.3
2,636,316	-				-1.0
2,636,321	+				+0.5
2,636,321	+				+0.5
2,636,321	+				+0.2
2,636,321	+				+0.4
2,636,321	+				+0.0
2,636,322	-				-0.0
2,636,327	+				+1.2
2,636,328	-				+1.2
2,636,526	+		Sama_2179	0.18	-0.3
2,636,527	-		Sama_2179	0.19	+1.1
2,636,544	-		Sama_2179	0.23	-0.5
2,636,594	+		Sama_2179	0.36	-0.1
2,636,605	-		Sama_2179	0.39	-0.6
2,636,605	-		Sama_2179	0.39	+0.2
2,636,605	-		Sama_2179	0.39	+1.0
2,636,641	-		Sama_2179	0.49	-1.6
2,636,666	+		Sama_2179	0.55	+1.4
2,636,667	-		Sama_2179	0.56	+0.1
2,636,672	+		Sama_2179	0.57	+2.2
2,636,672	+		Sama_2179	0.57	+1.4
2,636,673	-		Sama_2179	0.57	-0.0
2,636,693	-		Sama_2179	0.62	+0.4
2,636,798	+				+1.4
2,636,798	+				+0.5
2,636,874	+				+2.5
2,636,875	-				+0.1
2,636,875	-				-1.4
2,636,875	-				-0.6
2,637,012	+		Sama_2180	0.14	+1.5
2,637,013	-		Sama_2180	0.14	+1.0
2,637,075	+		Sama_2180	0.23	+1.7
2,637,076	-		Sama_2180	0.23	+0.1
2,637,076	-		Sama_2180	0.23	-1.6
2,637,076	-		Sama_2180	0.23	+0.5
2,637,091	-		Sama_2180	0.25	+0.1
2,637,128	+		Sama_2180	0.30	+0.4
2,637,129	-		Sama_2180	0.30	+1.4
2,637,245	+		Sama_2180	0.46	+1.0
2,637,267	-		Sama_2180	0.50	+0.4
2,637,299	+		Sama_2180	0.54	-0.6
2,637,299	+		Sama_2180	0.54	+1.7
2,637,299	+		Sama_2180	0.54	-0.6
2,637,299	+		Sama_2180	0.54	+1.4
2,637,300	-		Sama_2180	0.54	-0.0
2,637,317	-		Sama_2180	0.56	-1.4
2,637,324	+		Sama_2180	0.57	+1.0
2,637,325	-		Sama_2180	0.58	-0.2
2,637,408	+		Sama_2180	0.69	+1.0
2,637,545	-		Sama_2180	0.88	-0.0
2,637,545	-		Sama_2180	0.88	+0.6
2,637,545	-		Sama_2180	0.88	-0.3
2,637,565	+				+0.4
2,637,565	+				-0.4
2,637,566	-				+0.5
2,637,566	-				-0.2
2,637,566	-				-0.1
2,637,577	+				+1.7
2,637,578	-				+1.4
2,637,578	-				-0.4
2,637,580	+				+1.3
2,637,608	-				+0.4
2,637,608	-				+0.4
2,637,611	+				-0.6
2,637,612	-				-0.6
2,637,614	+				-0.2
2,637,615	-				+0.8
2,637,650	-				-0.6
2,637,662	+				-0.6
2,637,663	-				+0.5
2,637,764	-				+0.1
2,637,841	-				+0.6
2,637,841	-				-0.2
2,637,843	+				+1.2
2,637,843	+				-1.1
2,637,843	+				+0.1
2,637,843	+				+1.4
2,637,844	-				+0.4
2,637,844	-				-0.8
2,637,844	-				-0.0
2,637,844	-				-0.6
2,637,866	+		Sama_2181	0.10	-1.1
2,637,866	+		Sama_2181	0.10	-1.6
2,637,866	+		Sama_2181	0.10	-1.6
2,637,866	+		Sama_2181	0.10	-1.3
2,637,867	-		Sama_2181	0.10	+0.4
2,637,867	-		Sama_2181	0.10	+0.6
2,637,867	-		Sama_2181	0.10	+0.4
2,637,867	-		Sama_2181	0.10	+0.5
2,637,867	-		Sama_2181	0.10	+0.2
2,637,907	+		Sama_2181	0.14	+0.1
2,638,044	-		Sama_2181	0.28	-1.6
2,638,044	-		Sama_2181	0.28	+0.4
2,638,201	-		Sama_2181	0.44	+1.0
2,638,227	-		Sama_2181	0.46	+2.4
2,638,238	+		Sama_2181	0.48	+1.0
2,638,239	-		Sama_2181	0.48	+0.4
2,638,239	-		Sama_2181	0.48	+0.1
2,638,239	-		Sama_2181	0.48	+0.0
2,638,239	-		Sama_2181	0.48	+1.0
2,638,239	-		Sama_2181	0.48	-0.0
2,638,367	+		Sama_2181	0.61	-1.0
2,638,448	-		Sama_2181	0.69	+0.7
2,638,488	+		Sama_2181	0.73	-1.6
2,638,488	+		Sama_2181	0.73	+2.0
2,638,489	-		Sama_2181	0.73	+0.1
2,638,492	+		Sama_2181	0.73	-0.3
2,638,492	+		Sama_2181	0.73	-0.9
2,638,493	-		Sama_2181	0.73	+0.5
2,638,493	-		Sama_2181	0.73	+1.0
2,638,493	-		Sama_2181	0.73	-1.6
2,638,493	-		Sama_2181	0.73	+0.4
2,638,493	-		Sama_2181	0.73	-1.6
2,638,552	-		Sama_2181	0.79	+0.4
2,638,622	+		Sama_2181	0.86	+1.1
2,638,622	+		Sama_2181	0.86	+1.0
2,638,622	+		Sama_2181	0.86	+0.2
2,638,622	+		Sama_2181	0.86	-0.0
2,638,624	+		Sama_2181	0.86	+1.4
2,638,624	+		Sama_2181	0.86	-0.1
2,638,624	+		Sama_2181	0.86	-0.0
2,638,624	+		Sama_2181	0.86	+1.7
2,638,625	-		Sama_2181	0.86	+0.4
2,638,625	-		Sama_2181	0.86	-1.6
2,638,625	-		Sama_2181	0.86	+1.0
2,638,625	-		Sama_2181	0.86	-0.0
2,638,625	-		Sama_2181	0.86	+0.2
2,638,625	-		Sama_2181	0.86	-1.0
2,638,625	-		Sama_2181	0.86	+0.7
2,638,625	-		Sama_2181	0.86	-0.9
2,638,625	-		Sama_2181	0.86	-0.6