Experiment: m.b. Cobalt chloride 0.625 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PGA1_262p01690 and PGA1_262p01700 are separated by 22 nucleotides PGA1_262p01700 and PGA1_262p01710 are separated by 15 nucleotides PGA1_262p01710 and PGA1_262p01720 are separated by 12 nucleotides
PGA1_262p01690: PGA1_262p01690 - peptidase S15, at 184,437 to 186,416
_262p01690
PGA1_262p01700: PGA1_262p01700 - putative ABC transporter, solute-binding protein, at 186,439 to 187,989
_262p01700
PGA1_262p01710: PGA1_262p01710 - putative glutathione transport system permease protein, at 188,005 to 188,943
_262p01710
PGA1_262p01720: PGA1_262p01720 - putative glutathione transport system permease protein, at 188,956 to 189,834
_262p01720
Position (kb) 186
187
188 Strain fitness (log2 ratio) -2
-1
0
1
2 at 185.501 kb on + strand, within PGA1_262p01690 at 185.528 kb on - strand, within PGA1_262p01690 at 185.663 kb on - strand, within PGA1_262p01690 at 185.687 kb on - strand, within PGA1_262p01690 at 185.708 kb on + strand, within PGA1_262p01690 at 185.791 kb on + strand, within PGA1_262p01690 at 185.799 kb on - strand, within PGA1_262p01690 at 185.838 kb on - strand, within PGA1_262p01690 at 185.840 kb on + strand, within PGA1_262p01690 at 185.899 kb on - strand, within PGA1_262p01690 at 186.073 kb on - strand, within PGA1_262p01690 at 186.168 kb on - strand, within PGA1_262p01690 at 186.168 kb on - strand, within PGA1_262p01690 at 186.168 kb on - strand, within PGA1_262p01690 at 186.210 kb on - strand, within PGA1_262p01690 at 186.220 kb on - strand at 186.220 kb on - strand at 186.436 kb on - strand at 186.513 kb on - strand at 186.536 kb on - strand at 186.606 kb on - strand, within PGA1_262p01700 at 186.725 kb on - strand, within PGA1_262p01700 at 186.754 kb on + strand, within PGA1_262p01700 at 186.774 kb on - strand, within PGA1_262p01700 at 186.883 kb on - strand, within PGA1_262p01700 at 186.902 kb on + strand, within PGA1_262p01700 at 186.941 kb on + strand, within PGA1_262p01700 at 187.195 kb on - strand, within PGA1_262p01700 at 187.534 kb on - strand, within PGA1_262p01700 at 187.584 kb on + strand, within PGA1_262p01700 at 187.659 kb on - strand, within PGA1_262p01700 at 187.705 kb on + strand, within PGA1_262p01700 at 187.850 kb on - strand at 187.850 kb on - strand at 187.984 kb on + strand at 188.117 kb on + strand, within PGA1_262p01710 at 188.176 kb on + strand, within PGA1_262p01710 at 188.322 kb on + strand, within PGA1_262p01710 at 188.405 kb on + strand, within PGA1_262p01710 at 188.449 kb on + strand, within PGA1_262p01710 at 188.457 kb on - strand, within PGA1_262p01710 at 188.527 kb on + strand, within PGA1_262p01710 at 188.641 kb on + strand, within PGA1_262p01710 at 188.714 kb on - strand, within PGA1_262p01710 at 188.726 kb on + strand, within PGA1_262p01710 at 188.980 kb on + strand at 188.988 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.625 mM remove 185,501 + PGA1_262p01690 0.54 -0.6 185,528 - PGA1_262p01690 0.55 -0.5 185,663 - PGA1_262p01690 0.62 -0.4 185,687 - PGA1_262p01690 0.63 +0.8 185,708 + PGA1_262p01690 0.64 +0.4 185,791 + PGA1_262p01690 0.68 +2.0 185,799 - PGA1_262p01690 0.69 -2.0 185,838 - PGA1_262p01690 0.71 -0.6 185,840 + PGA1_262p01690 0.71 +1.0 185,899 - PGA1_262p01690 0.74 +0.0 186,073 - PGA1_262p01690 0.83 -0.4 186,168 - PGA1_262p01690 0.87 +1.0 186,168 - PGA1_262p01690 0.87 -0.6 186,168 - PGA1_262p01690 0.87 +0.0 186,210 - PGA1_262p01690 0.90 +1.2 186,220 - +0.7 186,220 - -0.2 186,436 - -0.8 186,513 - -0.8 186,536 - +1.6 186,606 - PGA1_262p01700 0.11 -0.1 186,725 - PGA1_262p01700 0.18 -0.8 186,754 + PGA1_262p01700 0.20 +1.5 186,774 - PGA1_262p01700 0.22 -0.7 186,883 - PGA1_262p01700 0.29 +1.8 186,902 + PGA1_262p01700 0.30 +0.8 186,941 + PGA1_262p01700 0.32 -1.3 187,195 - PGA1_262p01700 0.49 +0.0 187,534 - PGA1_262p01700 0.71 +0.1 187,584 + PGA1_262p01700 0.74 +0.3 187,659 - PGA1_262p01700 0.79 -1.0 187,705 + PGA1_262p01700 0.82 +0.0 187,850 - +0.4 187,850 - +1.8 187,984 + +0.0 188,117 + PGA1_262p01710 0.12 +0.2 188,176 + PGA1_262p01710 0.18 -0.6 188,322 + PGA1_262p01710 0.34 -1.0 188,405 + PGA1_262p01710 0.43 -1.9 188,449 + PGA1_262p01710 0.47 +1.2 188,457 - PGA1_262p01710 0.48 +0.7 188,527 + PGA1_262p01710 0.56 +0.3 188,641 + PGA1_262p01710 0.68 +1.2 188,714 - PGA1_262p01710 0.76 +0.9 188,726 + PGA1_262p01710 0.77 +0.8 188,980 + -1.6 188,988 - -0.4
Or see this region's nucleotide sequence