Experiment: m.b. Cobalt chloride 0.625 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PGA1_c21160 and PGA1_c21170 are separated by 72 nucleotides PGA1_c21170 and PGA1_c21180 are separated by 12 nucleotides
PGA1_c21160: PGA1_c21160 - putative metallopeptidase, at 2,190,966 to 2,192,123
_c21160
PGA1_c21170: PGA1_c21170 - dihydrofolate reductase FolA, at 2,192,196 to 2,192,672
_c21170
PGA1_c21180: PGA1_c21180 - thymidylate synthase ThyA, at 2,192,685 to 2,193,518
_c21180
Position (kb)
2192
2193 Strain fitness (log2 ratio)
-1
0
1
2 at 2191.203 kb on + strand, within PGA1_c21160 at 2191.248 kb on + strand, within PGA1_c21160 at 2191.346 kb on - strand, within PGA1_c21160 at 2191.495 kb on + strand, within PGA1_c21160 at 2191.495 kb on + strand, within PGA1_c21160 at 2191.503 kb on - strand, within PGA1_c21160 at 2191.617 kb on + strand, within PGA1_c21160 at 2191.625 kb on - strand, within PGA1_c21160 at 2191.643 kb on - strand, within PGA1_c21160 at 2191.654 kb on + strand, within PGA1_c21160 at 2191.661 kb on + strand, within PGA1_c21160 at 2191.699 kb on + strand, within PGA1_c21160 at 2191.715 kb on + strand, within PGA1_c21160 at 2191.812 kb on - strand, within PGA1_c21160 at 2191.921 kb on + strand, within PGA1_c21160 at 2191.927 kb on + strand, within PGA1_c21160 at 2191.935 kb on - strand, within PGA1_c21160 at 2191.954 kb on - strand, within PGA1_c21160 at 2191.954 kb on - strand, within PGA1_c21160 at 2191.995 kb on - strand, within PGA1_c21160 at 2192.023 kb on - strand at 2192.133 kb on + strand at 2192.672 kb on + strand at 2192.680 kb on - strand at 2192.680 kb on - strand at 2193.614 kb on - strand at 2193.668 kb on - strand at 2193.668 kb on - strand at 2193.668 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.625 mM remove 2,191,203 + PGA1_c21160 0.20 -0.4 2,191,248 + PGA1_c21160 0.24 -0.4 2,191,346 - PGA1_c21160 0.33 -1.0 2,191,495 + PGA1_c21160 0.46 +0.6 2,191,495 + PGA1_c21160 0.46 +0.0 2,191,503 - PGA1_c21160 0.46 -1.4 2,191,617 + PGA1_c21160 0.56 +1.4 2,191,625 - PGA1_c21160 0.57 -0.4 2,191,643 - PGA1_c21160 0.58 +2.2 2,191,654 + PGA1_c21160 0.59 -1.4 2,191,661 + PGA1_c21160 0.60 -1.0 2,191,699 + PGA1_c21160 0.63 +1.6 2,191,715 + PGA1_c21160 0.65 -0.1 2,191,812 - PGA1_c21160 0.73 -1.0 2,191,921 + PGA1_c21160 0.82 +0.0 2,191,927 + PGA1_c21160 0.83 +1.4 2,191,935 - PGA1_c21160 0.84 -0.6 2,191,954 - PGA1_c21160 0.85 +1.1 2,191,954 - PGA1_c21160 0.85 +0.6 2,191,995 - PGA1_c21160 0.89 -1.2 2,192,023 - +0.1 2,192,133 + -1.1 2,192,672 + +0.6 2,192,680 - -0.1 2,192,680 - +0.9 2,193,614 - +0.0 2,193,668 - +1.6 2,193,668 - -0.4 2,193,668 - +0.2
Or see this region's nucleotide sequence