Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_3914

Experiment: m.b. Tetracycline 0.006 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Tetracycline 0.006 mg/ml
141,128	+		Dshi_3912	0.72	+1.1
141,164	+		Dshi_3912	0.80	+3.3
141,165	+				+2.5
141,224	-				-0.6
141,224	-				-0.3
141,226	+				+0.9
141,311	+				+1.7
141,337	+				-0.3
141,345	-				+0.4
141,402	+				-0.9
141,402	+				-0.8
141,409	-				+2.1
141,410	-				+0.0
141,458	-				-0.2
141,496	-				-1.0
141,531	+		Dshi_3913	0.12	+2.7
141,531	+		Dshi_3913	0.12	-2.7
141,531	+		Dshi_3913	0.12	+1.8
141,576	+		Dshi_3913	0.19	-0.3
141,589	-		Dshi_3913	0.21	+3.0
141,602	+		Dshi_3913	0.23	+0.3
141,602	-		Dshi_3913	0.23	+1.4
141,716	+		Dshi_3913	0.40	+0.6
141,726	+		Dshi_3913	0.42	-0.4
141,740	-		Dshi_3913	0.44	-1.4
141,789	+		Dshi_3913	0.51	-0.1
141,792	-		Dshi_3913	0.52	-0.1
141,795	+		Dshi_3913	0.52	+0.6
141,800	+		Dshi_3913	0.53	+1.5
141,854	+		Dshi_3913	0.61	-0.2
141,933	+		Dshi_3913	0.73	-0.5
142,035	+		Dshi_3913	0.88	-1.4
142,196	+				+1.7
142,196	+				-1.1
142,196	+				+1.3
142,204	-				+0.7
142,238	+				+0.5
142,240	-				-0.2
142,248	-				-0.1
142,274	+		Dshi_3914	0.11	-1.5
142,371	-		Dshi_3914	0.17	-0.6
142,411	-		Dshi_3914	0.20	+1.1
142,493	+		Dshi_3914	0.26	-0.4
142,618	-		Dshi_3914	0.34	+1.1
142,625	+		Dshi_3914	0.34	+0.1
142,650	+		Dshi_3914	0.36	-0.7
142,658	-		Dshi_3914	0.37	+0.5
142,764	-		Dshi_3914	0.44	-0.3
142,779	-		Dshi_3914	0.45	-0.4
142,813	-		Dshi_3914	0.47	+1.6
142,820	+		Dshi_3914	0.48	-2.0
142,828	-		Dshi_3914	0.48	-0.2
142,918	+		Dshi_3914	0.54	+0.5
142,930	+		Dshi_3914	0.55	-0.0
142,967	+		Dshi_3914	0.58	+1.5
142,975	-		Dshi_3914	0.58	-1.2
143,053	+		Dshi_3914	0.63	-0.3
143,053	+		Dshi_3914	0.63	+0.5
143,065	-		Dshi_3914	0.64	-0.1
143,103	+		Dshi_3914	0.67	+0.7
143,168	-		Dshi_3914	0.71	-0.6
143,289	-		Dshi_3914	0.79	+1.7
143,292	-		Dshi_3914	0.80	+0.4
143,339	-		Dshi_3914	0.83	+2.3
143,341	-		Dshi_3914	0.83	-0.0
143,346	-		Dshi_3914	0.83	+0.5
143,358	-		Dshi_3914	0.84	+0.8
143,434	+		Dshi_3914	0.89	-0.5
143,515	-				+0.1
143,519	+				+0.1
143,624	+				+1.9
143,668	-				+2.1
143,693	+				+0.1
143,710	+				+1.5
143,718	-				+0.0
143,750	+				+0.8
143,811	-		Dshi_3915	0.19	-1.7
143,818	+		Dshi_3915	0.23	+0.3
143,826	-		Dshi_3915	0.28	-0.4
143,826	-		Dshi_3915	0.28	-0.1
143,826	-		Dshi_3915	0.28	-0.5
143,848	+		Dshi_3915	0.41	+0.1
143,922	-				+0.4
143,922	-				+1.9
143,922	-				+1.6
143,922	-				+0.7
144,053	-		Dshi_3916	0.35	+0.1
144,065	-		Dshi_3916	0.38	-3.8
144,102	-		Dshi_3916	0.47	-3.0
144,128	-		Dshi_3916	0.53	+0.3
144,157	+		Dshi_3916	0.60	-1.2
144,159	+		Dshi_3916	0.61	+1.0
144,165	-		Dshi_3916	0.62	+0.0
144,188	-		Dshi_3916	0.68	+0.7
144,188	-		Dshi_3916	0.68	+0.4
144,210	-		Dshi_3916	0.73	+0.1
144,216	+		Dshi_3916	0.75	-0.1
144,217	+		Dshi_3916	0.75	-0.1
144,217	+		Dshi_3916	0.75	-0.0
144,225	-		Dshi_3916	0.77	-0.8
144,276	+		Dshi_3916	0.89	+1.5
144,293	+				-1.4
144,300	+				-0.1
144,305	+				-1.0
144,308	-				-0.9
144,313	-				-0.6
144,313	-				-0.4
144,313	-				+0.7
144,313	-				+2.5
144,313	-				-1.8
144,334	-				-1.5
144,349	-				+2.8
144,362	+				-0.4
144,367	+				+0.1
144,367	+				-1.3
144,367	+				+0.3
144,367	+				+1.2
144,367	+				-0.2
144,367	+				+2.2
144,367	+				-0.1
144,375	-				+0.2
144,375	-				-1.6
144,375	-				+0.6
144,375	-				+0.7
144,375	-				-1.1
144,375	-				+0.6
144,375	-				+0.6
144,375	-				+0.2
144,377	+				+0.2
144,380	-				+0.3
144,381	+				-0.2
144,382	+				+0.7
144,382	+				+0.2
144,385	-				+1.2
144,390	-				+1.5
144,390	-				-0.9
144,390	-				+0.3
144,487	+		Dshi_3917	0.13	+1.3
144,495	-		Dshi_3917	0.15	+3.6
144,503	+		Dshi_3917	0.16	+0.5
144,545	+		Dshi_3917	0.25	+2.5
144,568	+		Dshi_3917	0.30	-1.2
144,568	+		Dshi_3917	0.30	-1.7
144,576	-		Dshi_3917	0.32	-1.9
144,581	-		Dshi_3917	0.33	-0.5
144,586	-		Dshi_3917	0.34	-0.3