Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_3885

Experiment: m.b. Tetracycline 0.006 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Tetracycline 0.006 mg/ml
107,292	-		Dshi_3884	0.47	-0.0
107,330	+		Dshi_3884	0.49	+0.3
107,340	-		Dshi_3884	0.50	-0.3
107,343	+		Dshi_3884	0.50	-0.2
107,351	-		Dshi_3884	0.51	+0.1
107,377	-		Dshi_3884	0.53	-1.3
107,389	+		Dshi_3884	0.53	-0.6
107,460	-		Dshi_3884	0.59	+0.1
107,460	-		Dshi_3884	0.59	-2.2
107,532	+		Dshi_3884	0.64	-1.1
107,711	-		Dshi_3884	0.76	-2.2
107,804	-		Dshi_3884	0.83	-0.4
107,818	+		Dshi_3884	0.84	-0.9
107,934	+				-0.6
107,989	+				-0.7
107,989	+				+0.1
107,997	-				+2.3
107,997	-				+0.4
108,012	+				-0.5
108,012	+				+1.7
108,012	+				+1.3
108,020	-				+1.1
108,020	-				+1.1
108,053	-				+1.3
108,106	+				-0.7
108,129	+				-0.3
108,165	-				-1.9
108,172	+				-0.5
108,205	+				+0.3
108,228	+				+0.4
108,238	-				+1.7
108,341	-				-0.5
108,354	+				-0.3
108,354	+				-1.1
108,363	+				-1.8
108,371	-				-0.3
108,380	+		Dshi_3885	0.10	-0.5
108,382	+		Dshi_3885	0.10	-0.6
108,420	+		Dshi_3885	0.13	+0.9
108,420	+		Dshi_3885	0.13	-0.3
108,420	+		Dshi_3885	0.13	-0.9
108,420	+		Dshi_3885	0.13	-0.2
108,420	+		Dshi_3885	0.13	+0.2
108,420	+		Dshi_3885	0.13	-0.4
108,420	+		Dshi_3885	0.13	+0.2
108,420	+		Dshi_3885	0.13	-2.2
108,420	+		Dshi_3885	0.13	-3.0
108,420	+		Dshi_3885	0.13	-3.2
108,583	-		Dshi_3885	0.23	-0.1
108,607	-		Dshi_3885	0.25	-0.5
108,617	+		Dshi_3885	0.25	-1.0
108,634	+		Dshi_3885	0.26	-2.2
108,648	-		Dshi_3885	0.27	+0.1
108,660	+		Dshi_3885	0.28	-3.7
108,670	+		Dshi_3885	0.29	-0.1
108,708	+		Dshi_3885	0.31	+0.1
108,714	+		Dshi_3885	0.31	-0.6
108,783	-		Dshi_3885	0.36	-1.5
108,799	+		Dshi_3885	0.37	-0.6
108,833	+		Dshi_3885	0.39	-1.5
108,849	-		Dshi_3885	0.40	+0.3
108,849	-		Dshi_3885	0.40	-1.3
108,872	-		Dshi_3885	0.41	-2.2
108,891	-		Dshi_3885	0.43	-2.1
108,905	-		Dshi_3885	0.43	+2.9
108,982	-		Dshi_3885	0.48	-2.2
108,982	-		Dshi_3885	0.48	+0.9
109,034	-		Dshi_3885	0.52	-2.4
109,043	+		Dshi_3885	0.52	-1.0
109,210	+		Dshi_3885	0.63	-0.9
109,210	+		Dshi_3885	0.63	+0.3
109,210	+		Dshi_3885	0.63	+0.9
109,210	+		Dshi_3885	0.63	-1.2
109,218	-		Dshi_3885	0.63	-1.0
109,218	-		Dshi_3885	0.63	-1.2
109,242	+		Dshi_3885	0.65	+1.4
109,338	+		Dshi_3885	0.71	-1.1
109,338	+		Dshi_3885	0.71	-0.1
109,346	-		Dshi_3885	0.71	-0.0
109,352	+		Dshi_3885	0.72	-0.6
109,454	-		Dshi_3885	0.78	-0.7
109,518	+		Dshi_3885	0.82	-0.5
109,608	+		Dshi_3885	0.88	-1.1
109,616	-		Dshi_3885	0.89	-0.1
109,622	-		Dshi_3885	0.89	+1.9
109,671	+				-2.1
109,674	-				+0.1
109,691	-				-0.5
109,693	+				-0.5
109,707	-				-1.1
109,709	+				+0.8
109,714	-				+0.9
109,729	+				-1.1
109,752	+				-2.7
109,767	+				-0.8
109,797	+				+0.5
109,802	+				+3.7
109,804	+				-1.4
109,810	-				-1.5
109,852	+				+0.3
109,860	-				-3.2
109,860	-				+0.1
109,860	-				-0.1
109,887	-				-2.5
109,914	-				-0.6
109,920	-				+1.0
109,941	+				+0.0
109,947	+				+0.3
109,949	-				+0.9
109,952	+				+0.9
109,953	+				-2.9
109,961	-				-1.0
109,988	+				+0.3
109,989	+				-3.8
110,009	-				-0.9
110,051	-				+0.6
110,066	+				-1.2
110,108	-		Dshi_3886	0.11	-0.4
110,137	+		Dshi_3886	0.16	+0.5
110,137	+		Dshi_3886	0.16	+0.3
110,145	-		Dshi_3886	0.17	-0.9
110,145	-		Dshi_3886	0.17	+0.7
110,168	-		Dshi_3886	0.21	-2.5
110,194	+		Dshi_3886	0.25	+0.5
110,221	+		Dshi_3886	0.29	+2.1
110,262	+		Dshi_3886	0.36	+0.0
110,314	+		Dshi_3886	0.44	+0.1
110,316	-		Dshi_3886	0.44	-2.7
110,333	-		Dshi_3886	0.47	-2.5
110,362	-		Dshi_3886	0.52	+3.6
110,427	-		Dshi_3886	0.62	+0.7
110,439	-		Dshi_3886	0.64	-0.9
110,485	+		Dshi_3886	0.72	+0.9
110,488	+		Dshi_3886	0.72	-1.1
110,527	-		Dshi_3886	0.79	+0.3
110,572	+		Dshi_3886	0.86	+0.5
110,575	-		Dshi_3886	0.86	+1.7
110,611	-				+1.5
110,642	+				+0.4
110,647	+				+1.7
110,660	+				-1.4
110,687	+				+0.1
110,711	-		Dshi_3887	0.11	+0.1
110,743	+		Dshi_3887	0.19	+0.5