Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_3722

Experiment: m.b. Tetracycline 0.006 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Tetracycline 0.006 mg/ml
127,919	-		Dshi_3720	0.38	+1.8
128,013	-		Dshi_3720	0.50	-0.1
128,018	-		Dshi_3720	0.50	-0.4
128,038	+		Dshi_3720	0.53	+1.8
128,038	+		Dshi_3720	0.53	-0.2
128,038	+		Dshi_3720	0.53	-0.6
128,065	+		Dshi_3720	0.56	-1.3
128,065	+		Dshi_3720	0.56	+0.9
128,073	-		Dshi_3720	0.57	-1.5
128,158	-		Dshi_3720	0.67	-0.5
128,189	+		Dshi_3720	0.71	-0.2
128,200	+		Dshi_3720	0.72	-1.2
128,276	+		Dshi_3720	0.81	-0.3
128,284	-		Dshi_3720	0.82	+2.2
128,345	+		Dshi_3720	0.90	-1.5
128,345	+		Dshi_3720	0.90	-0.7
128,400	-				+0.2
128,462	-				+0.7
128,462	-				-0.2
128,462	-				-3.0
128,490	-		Dshi_3721	0.14	-0.4
128,527	+		Dshi_3721	0.22	+1.2
128,663	+		Dshi_3721	0.48	+0.5
128,669	+		Dshi_3721	0.49	-1.5
128,669	+		Dshi_3721	0.49	-1.3
128,671	-		Dshi_3721	0.50	+0.1
128,782	+		Dshi_3721	0.72	-0.2
128,891	+				-0.2
128,906	-				+0.4
128,906	-				-1.3
128,909	+				-0.6
128,997	+				-1.9
129,047	-				-1.1
129,060	+				-1.2
129,090	+		Dshi_3722	0.11	-1.9
129,123	+		Dshi_3722	0.13	-1.1
129,130	-		Dshi_3722	0.14	-0.6
129,206	+		Dshi_3722	0.19	-0.9
129,214	-		Dshi_3722	0.19	-0.7
129,238	+		Dshi_3722	0.21	-1.7
129,246	-		Dshi_3722	0.21	+0.1
129,281	-		Dshi_3722	0.24	-3.1
129,281	-		Dshi_3722	0.24	-1.3
129,327	-		Dshi_3722	0.27	-2.4
129,358	+		Dshi_3722	0.29	-1.3
129,366	-		Dshi_3722	0.29	+0.1
129,373	-		Dshi_3722	0.30	+0.6
129,385	-		Dshi_3722	0.30	-1.3
129,419	+		Dshi_3722	0.33	+0.4
129,419	+		Dshi_3722	0.33	-0.5
129,427	-		Dshi_3722	0.33	-1.3
129,427	-		Dshi_3722	0.33	-0.1
129,427	-		Dshi_3722	0.33	+0.8
129,427	-		Dshi_3722	0.33	-0.6
129,455	+		Dshi_3722	0.35	-1.9
129,455	+		Dshi_3722	0.35	-1.7
129,455	+		Dshi_3722	0.35	-1.7
129,463	-		Dshi_3722	0.35	+0.1
129,486	-		Dshi_3722	0.37	-0.3
129,535	+		Dshi_3722	0.40	-0.4
129,565	-		Dshi_3722	0.42	-1.2
129,583	+		Dshi_3722	0.43	+1.0
129,616	+		Dshi_3722	0.45	-1.0
129,631	+		Dshi_3722	0.46	-2.1
129,657	-		Dshi_3722	0.48	-0.2
129,673	+		Dshi_3722	0.49	-1.5
129,673	+		Dshi_3722	0.49	+0.2
129,677	+		Dshi_3722	0.49	-0.5
129,681	-		Dshi_3722	0.50	-0.4
129,681	-		Dshi_3722	0.50	-2.3
129,690	+		Dshi_3722	0.50	-1.2
129,698	-		Dshi_3722	0.51	-3.6
129,729	+		Dshi_3722	0.53	-1.0
129,737	-		Dshi_3722	0.53	-1.6
129,767	+		Dshi_3722	0.55	+0.6
129,776	+		Dshi_3722	0.56	-0.9
129,780	-		Dshi_3722	0.56	+0.5
129,830	+		Dshi_3722	0.59	-2.6
129,831	+		Dshi_3722	0.59	-0.5
129,839	-		Dshi_3722	0.60	-0.4
129,915	+		Dshi_3722	0.65	-0.8
129,915	+		Dshi_3722	0.65	+0.4
129,919	+		Dshi_3722	0.65	-1.1
129,966	+		Dshi_3722	0.68	-0.5
130,008	-		Dshi_3722	0.71	-1.5
130,016	-		Dshi_3722	0.71	-1.3
130,021	+		Dshi_3722	0.72	-0.9
130,089	+		Dshi_3722	0.76	+3.4
130,111	-		Dshi_3722	0.78	-0.8
130,130	+		Dshi_3722	0.79	+1.3
130,197	+		Dshi_3722	0.83	+1.2
130,213	+		Dshi_3722	0.84	-1.6
130,220	-		Dshi_3722	0.85	+0.2
130,221	-		Dshi_3722	0.85	-0.5
130,223	+		Dshi_3722	0.85	+0.5
130,235	-		Dshi_3722	0.86	-0.4
130,235	-		Dshi_3722	0.86	+1.1
130,275	+		Dshi_3722	0.88	-0.6
130,276	-		Dshi_3722	0.88	+1.1
130,283	+		Dshi_3722	0.89	-0.9
130,285	+		Dshi_3722	0.89	-1.4
130,285	+		Dshi_3722	0.89	-0.5
130,293	-		Dshi_3722	0.89	-0.3
130,293	-		Dshi_3722	0.89	+1.1
130,365	-				-2.1
130,423	+				-0.5
130,425	+				-0.3
130,425	+				-0.7
130,437	-				+0.1
130,437	-				-1.7
130,439	-				+0.6
130,449	+				-1.4
130,449	+				-1.2
130,457	-				+0.4
130,457	-				-2.3
130,457	-				-1.3
130,460	+				-2.2
130,460	+				-0.4
130,460	+				+1.8
130,460	+				-0.9
130,468	-				-0.9
130,471	-				-0.3
130,489	+				+0.6
130,521	-				-1.7
130,606	+		Dshi_3723	0.16	-1.2
131,047	+		Dshi_3723	0.70	+3.5
131,316	-				+0.9
131,316	-				-0.2
131,339	-				-0.0
131,358	-				+0.8
131,367	-				+2.8
131,371	+				-0.5
131,371	+				-0.2
131,376	+				-0.3
131,379	-				+2.2
131,420	+				-1.0