Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_3350

Experiment: m.b. Tetracycline 0.006 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Tetracycline 0.006 mg/ml
3,517,198	+		Dshi_3349	0.15	-0.5
3,517,204	-		Dshi_3349	0.16	-1.5
3,517,206	-		Dshi_3349	0.16	-0.4
3,517,211	+		Dshi_3349	0.16	+0.4
3,517,267	+		Dshi_3349	0.22	-0.1
3,517,311	+		Dshi_3349	0.26	-1.8
3,517,468	-		Dshi_3349	0.41	-3.0
3,517,491	+		Dshi_3349	0.43	+2.4
3,517,545	-		Dshi_3349	0.48	-0.6
3,517,584	-		Dshi_3349	0.52	-2.5
3,517,688	-		Dshi_3349	0.61	+1.8
3,517,728	-		Dshi_3349	0.65	-0.6
3,517,808	-		Dshi_3349	0.73	+0.5
3,517,810	-		Dshi_3349	0.73	+0.1
3,517,824	+		Dshi_3349	0.74	-0.9
3,517,879	-		Dshi_3349	0.79	+0.4
3,517,881	+		Dshi_3349	0.80	-2.5
3,517,889	-		Dshi_3349	0.80	+0.9
3,517,976	+		Dshi_3349	0.89	-0.6
3,517,999	+				+0.4
3,518,002	-				-1.3
3,518,013	-				-0.6
3,518,044	-				-0.2
3,518,044	-				-0.9
3,518,049	-				+0.1
3,518,110	-				+2.4
3,518,143	+				+0.4
3,518,185	+				+0.6
3,518,277	+				-0.9
3,518,285	-				+0.9
3,518,418	+		Dshi_3350	0.15	-1.0
3,518,450	-		Dshi_3350	0.16	-0.9
3,518,459	+		Dshi_3350	0.17	-0.4
3,518,467	-		Dshi_3350	0.17	-1.5
3,518,508	+		Dshi_3350	0.19	-0.2
3,518,566	+		Dshi_3350	0.22	-0.4
3,518,566	+		Dshi_3350	0.22	-0.6
3,518,566	+		Dshi_3350	0.22	+3.7
3,518,566	+		Dshi_3350	0.22	-2.6
3,518,776	-		Dshi_3350	0.32	+0.7
3,518,929	-		Dshi_3350	0.39	+1.6
3,518,937	-		Dshi_3350	0.39	-0.2
3,519,027	+		Dshi_3350	0.43	-0.2
3,519,035	-		Dshi_3350	0.44	+0.4
3,519,094	-		Dshi_3350	0.46	+0.1
3,519,181	-		Dshi_3350	0.51	-0.6
3,519,200	+		Dshi_3350	0.51	-0.7
3,519,204	-		Dshi_3350	0.52	-2.2
3,519,295	-		Dshi_3350	0.56	+3.2
3,519,317	-		Dshi_3350	0.57	-3.0
3,519,349	-		Dshi_3350	0.58	+1.6
3,519,411	-		Dshi_3350	0.61	-2.1
3,519,471	-		Dshi_3350	0.64	-2.2
3,519,545	+		Dshi_3350	0.68	-0.3
3,519,600	+		Dshi_3350	0.70	+0.4
3,519,602	+		Dshi_3350	0.70	-0.1
3,519,715	-		Dshi_3350	0.76	+2.4
3,519,736	-		Dshi_3350	0.77	-0.6
3,519,881	-		Dshi_3350	0.83	+0.2
3,519,970	-		Dshi_3350	0.88	+1.4
3,520,036	+				-0.5
3,520,051	+				-0.6
3,520,059	-				-0.8
3,520,120	+				+0.6
3,520,133	-				+0.4
3,520,170	+				+3.2
3,520,178	-				-0.8
3,520,200	-				-1.7
3,520,218	+				+1.2
3,520,219	-				-2.1
3,520,233	-				-0.7
3,520,245	+				+2.4
3,520,248	+				+3.5
3,520,266	+				-0.4
3,520,274	-				-1.8
3,520,275	-				+0.4
3,520,276	+				-2.0
3,520,347	+				-3.7
3,520,352	+				+0.0
3,520,355	-				+0.6
3,520,382	+				-0.9
3,520,417	+				-1.3
3,520,460	+				+0.5
3,520,470	+				-1.7
3,520,566	-		Dshi_3351	0.16	-1.9
3,520,572	+		Dshi_3351	0.16	-3.1
3,520,620	+		Dshi_3351	0.20	-2.6
3,520,655	+		Dshi_3351	0.22	+0.4
3,520,721	-		Dshi_3351	0.26	+0.3
3,520,746	+		Dshi_3351	0.28	-0.4
3,520,848	+		Dshi_3351	0.35	-2.1
3,520,967	+		Dshi_3351	0.43	-1.9
3,520,997	-		Dshi_3351	0.45	+0.7
3,521,014	+		Dshi_3351	0.46	-0.6
3,521,022	-		Dshi_3351	0.47	-1.2
3,521,057	+		Dshi_3351	0.49	-4.0
3,521,065	-		Dshi_3351	0.50	-2.2
3,521,143	+		Dshi_3351	0.55	+0.4
3,521,148	+		Dshi_3351	0.55	-0.8
3,521,156	-		Dshi_3351	0.56	-1.2
3,521,225	-		Dshi_3351	0.61	-0.7